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    IntS11 Integrator 11 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43506, updated on 9-Dec-2024

    Summary

    Official Symbol
    IntS11provided by FlyBase
    Official Full Name
    Integrator 11provided by FlyBase
    Primary source
    FLYBASE:FBgn0039691
    Locus tag
    Dmel_CG1972
    See related
    AllianceGenome:FB:FBgn0039691
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG1972; Dmel\CG1972; dRC-68; Int11
    Summary
    Predicted to enable RNA endonuclease activity. Involved in snRNA 3'-end processing. Located in cytosol and nucleus. Is expressed in several structures, including adult CNS glial cell; adult head; central nervous system; and spermatozoon. Used to study neurodevelopmental disorder with motor and language delay, ocular defects, and brain abnormalities. Human ortholog(s) of this gene implicated in neurodevelopmental disorder with motor and language delay, ocular defects, and brain abnormalities. Orthologous to human INTS11 (integrator complex subunit 11). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See IntS11 in Genome Data Viewer
    Location:
    99B10-99B10; 3-99 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (29745337..29747513)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (25571059..25573235)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Glucosamine-phosphate N-acetyltransferase Neighboring gene WD repeat domain 24 Neighboring gene antisense RNA:CR46109 Neighboring gene ATP synthase, gamma subunit Neighboring gene yata

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA endonuclease activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables RNA endonuclease activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in snRNA 3'-end processing IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in snRNA processing IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in snRNA processing ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of integrator complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of integrator complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    integrator 11
    Names
    CG1972-PA
    IntS11-PA

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      29745337..29747513
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143464.4NP_651721.1  integrator 11 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651721.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VAH9
      Related
      FBpp0084842
      Conserved Domains (4) summary
      smart01027
      Location:245363
      Beta-Casp; Beta-Casp domain
      COG1236
      Location:4446
      YSH1; RNA processing exonuclease, beta-lactamase fold, Cft2 family [Translation, ribosomal structure and biogenesis]
      pfam07521
      Location:376416
      RMMBL; RNA-metabolizing metallo-beta-lactamase
      cd16291
      Location:6204
      INTS11-like_MBL-fold; Integrator complex subunit 11, and related proteins; MBL-fold metallo-hydrolase domain