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    Rgs12 regulator of G-protein signaling 12 [ Mus musculus (house mouse) ]

    Gene ID: 71729, updated on 27-Nov-2024

    Summary

    Official Symbol
    Rgs12provided by MGI
    Official Full Name
    regulator of G-protein signaling 12provided by MGI
    Primary source
    MGI:MGI:1918979
    See related
    Ensembl:ENSMUSG00000029101 AllianceGenome:MGI:1918979
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    E130309H11; 1200016K18Rik; 4632412M04Rik
    Summary
    Predicted to enable G-protein alpha-subunit binding activity and GTPase activator activity. Predicted to be involved in termination of G protein-coupled receptor signaling pathway. Predicted to be located in several cellular components, including apical dendrite; neuronal cell body; and nuclear lumen. Predicted to be part of protein-containing complex. Predicted to be active in cytoplasm; nucleus; and plasma membrane. Predicted to colocalize with synapse. Is expressed in several structures, including heart; nervous system; placenta; trunk; and uterus. Orthologous to human RGS12 (regulator of G protein signaling 12). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in lung adult (RPKM 17.2), ovary adult (RPKM 9.8) and 27 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Rgs12 in Genome Data Viewer
    Location:
    5 B2; 5 17.96 cM
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (35106273..35196988)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (34948929..35039642)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene huntingtin Neighboring gene Myb/SANT-like DNA-binding domain containing 1 Neighboring gene STARR-seq mESC enhancer starr_12848 Neighboring gene STARR-seq mESC enhancer starr_12849 Neighboring gene microRNA 3097 Neighboring gene hepatocyte growth factor activator Neighboring gene docking protein 7

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (4) 
    • Targeted (7)  1 citation

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables G-protein alpha-subunit binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables GTPase activator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables GTPase activator activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables GTPase regulator activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in termination of G protein-coupled receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in apical dendrite ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in dendrite ISO
    Inferred from Sequence Orthology
    more info
     
    located_in dendrite ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in neuronal cell body ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleolus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of protein-containing complex ISO
    Inferred from Sequence Orthology
    more info
     
    located_in synapse ISO
    Inferred from Sequence Orthology
    more info
     
    colocalizes_with synapse ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    regulator of G-protein signaling 12

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001163512.2NP_001156984.1  regulator of G-protein signaling 12 isoform B

      Status: VALIDATED

      Source sequence(s)
      AC126447
      Consensus CDS
      CCDS51472.1
      UniProtKB/TrEMBL
      E9Q1K7, Q9D677
      Related
      ENSMUSP00000109920.2, ENSMUST00000114281.8
      Conserved Domains (7) summary
      smart00455
      Location:377446
      RBD; Raf-like Ras-binding domain
      cd01817
      Location:305377
      RGS12_RBD; Ubiquitin domain of RGS12 and RGS14
      cd08742
      Location:58172
      RGS_RGS12; Regulator of G protein signaling (RGS) domain found in the RGS12 protein
      smart00390
      Location:530551
      GoLoco; LGN motif, putative GEFs specific for G-alpha GTPases
      pfam16611
      Location:448518
      RGS12_us2; Unstructured region between RBD and GoLoco
      pfam16612
      Location:593703
      RGS12_usC; C-terminal unstructured region of RGS12
      pfam16613
      Location:178275
      RGS12_us1; Unstructured region of RGS12
    2. NM_001403471.1NP_001390400.1  regulator of G-protein signaling 12 isoform A

      Status: VALIDATED

      Source sequence(s)
      AC126447, AC133204
      UniProtKB/Swiss-Prot
      E9PXX2, Q8CGE9
    3. NM_001403472.1NP_001390401.1  regulator of G-protein signaling 12 isoform C

      Status: VALIDATED

      Source sequence(s)
      AC126447, AC133204
    4. NM_001403473.1NP_001390402.1  regulator of G-protein signaling 12 isoform D

      Status: VALIDATED

      Source sequence(s)
      AC126447
      UniProtKB/TrEMBL
      D3Z0G6
      Related
      ENSMUSP00000109923.2, ENSMUST00000114284.8
    5. NM_001403474.1NP_001390403.1  regulator of G-protein signaling 12 isoform E

      Status: VALIDATED

      Source sequence(s)
      AC126447
    6. NM_001403475.1NP_001390404.1  regulator of G-protein signaling 12 isoform F

      Status: VALIDATED

      Source sequence(s)
      AC126447
    7. NM_001403476.1NP_001390405.1  regulator of G-protein signaling 12 isoform G

      Status: VALIDATED

      Source sequence(s)
      AC126447
    8. NM_001403477.1NP_001390406.1  regulator of G-protein signaling 12 isoform H

      Status: VALIDATED

      Source sequence(s)
      AC126447
    9. NM_001403478.1NP_001390407.1  regulator of G-protein signaling 12 isoform I

      Status: VALIDATED

      Source sequence(s)
      AC126447
      UniProtKB/TrEMBL
      Q3TTW9
      Related
      ENSMUSP00000109919.2, ENSMUST00000114280.8
    10. NM_173402.3NP_775578.2  regulator of G-protein signaling 12 isoform A

      Status: VALIDATED

      Source sequence(s)
      AC126447, AC133204
      Consensus CDS
      CCDS19222.1
      UniProtKB/Swiss-Prot
      E9PXX2, Q8CGE9
      Related
      ENSMUSP00000030984.8, ENSMUST00000030984.14
      Conserved Domains (9) summary
      smart00455
      Location:10351104
      RBD; Raf-like Ras-binding domain
      cd01817
      Location:9631035
      RGS12_RBD; Ubiquitin domain of RGS12 and RGS14
      cd08742
      Location:716830
      RGS_RGS12; Regulator of G protein signaling (RGS) domain found in the RGS12 protein
      cd00992
      Location:1995
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd13162
      Location:227358
      PTB_RGS12; Regulator of G-protein signaling 12 Phosphotyrosine-binding (PTB) PH-like fold
      pfam02188
      Location:11881209
      GoLoco; GoLoco motif
      pfam16611
      Location:11061176
      RGS12_us2; Unstructured region between RBD and GoLoco
      pfam16612
      Location:12511361
      RGS12_usC; C-terminal unstructured region of RGS12
      pfam16613
      Location:836933
      RGS12_us1; Unstructured region of RGS12

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      35106273..35196988
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006504120.3XP_006504183.1  regulator of G-protein signaling 12 isoform X1

      UniProtKB/TrEMBL
      E9Q652
      Conserved Domains (9) summary
      cd08742
      Location:716830
      RGS_RGS12; Regulator of G protein signaling (RGS) domain found in the RGS12 protein
      cd00992
      Location:1995
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd13162
      Location:227358
      PTB_RGS12; Regulator of G-protein signaling 12 Phosphotyrosine-binding (PTB) PH-like fold
      cd17136
      Location:9621031
      RBD1_RGS12; Ras-binding domain (RBD) 1 of regulator of G protein signaling 12 (RGS12)
      pfam02188
      Location:11891209
      GoLoco; GoLoco motif
      pfam16611
      Location:11061180
      RGS12_us2; Unstructured region between RBD and GoLoco
      pfam16612
      Location:12381361
      RGS12_usC; C-terminal unstructured region of RGS12
      pfam16613
      Location:836949
      RGS12_us1; Unstructured region of RGS12
      cl28922
      Location:10321104
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
    2. XM_036165494.1XP_036021387.1  regulator of G-protein signaling 12 isoform X2

      Conserved Domains (9) summary
      cd08742
      Location:716830
      RGS_RGS12; Regulator of G protein signaling (RGS) domain found in the RGS12 protein
      smart00390
      Location:11881209
      GoLoco; LGN motif, putative GEFs specific for G-alpha GTPases
      cd00992
      Location:1995
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd13162
      Location:227358
      PTB_RGS12; Regulator of G-protein signaling 12 Phosphotyrosine-binding (PTB) PH-like fold
      cd17136
      Location:9621031
      RBD1_RGS12; Ras-binding domain (RBD) 1 of regulator of G protein signaling 12 (RGS12)
      pfam16611
      Location:11061180
      RGS12_us2; Unstructured region between RBD and GoLoco
      pfam16612
      Location:12381378
      RGS12_usC; C-terminal unstructured region of RGS12
      pfam16613
      Location:836949
      RGS12_us1; Unstructured region of RGS12
      cl28922
      Location:10321104
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
    3. XM_006504124.4XP_006504187.1  regulator of G-protein signaling 12 isoform X4

      Conserved Domains (7) summary
      cd08742
      Location:716830
      RGS_RGS12; Regulator of G protein signaling (RGS) domain found in the RGS12 protein
      cd00992
      Location:1995
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd13162
      Location:227358
      PTB_RGS12; Regulator of G-protein signaling 12 Phosphotyrosine-binding (PTB) PH-like fold
      cd17136
      Location:9621031
      RBD1_RGS12; Ras-binding domain (RBD) 1 of regulator of G protein signaling 12 (RGS12)
      pfam16611
      Location:11061138
      RGS12_us2; Unstructured region between RBD and GoLoco
      pfam16613
      Location:836949
      RGS12_us1; Unstructured region of RGS12
      cl28922
      Location:10321104
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
    4. XM_006504121.4XP_006504184.1  regulator of G-protein signaling 12 isoform X1

      UniProtKB/TrEMBL
      E9Q652
      Related
      ENSMUSP00000084970.5, ENSMUST00000087684.11
      Conserved Domains (9) summary
      cd08742
      Location:716830
      RGS_RGS12; Regulator of G protein signaling (RGS) domain found in the RGS12 protein
      cd00992
      Location:1995
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd13162
      Location:227358
      PTB_RGS12; Regulator of G-protein signaling 12 Phosphotyrosine-binding (PTB) PH-like fold
      cd17136
      Location:9621031
      RBD1_RGS12; Ras-binding domain (RBD) 1 of regulator of G protein signaling 12 (RGS12)
      pfam02188
      Location:11891209
      GoLoco; GoLoco motif
      pfam16611
      Location:11061180
      RGS12_us2; Unstructured region between RBD and GoLoco
      pfam16612
      Location:12381361
      RGS12_usC; C-terminal unstructured region of RGS12
      pfam16613
      Location:836949
      RGS12_us1; Unstructured region of RGS12
      cl28922
      Location:10321104
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
    5. XM_006504122.4XP_006504185.1  regulator of G-protein signaling 12 isoform X1

      UniProtKB/TrEMBL
      E9Q652
      Conserved Domains (9) summary
      cd08742
      Location:716830
      RGS_RGS12; Regulator of G protein signaling (RGS) domain found in the RGS12 protein
      cd00992
      Location:1995
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd13162
      Location:227358
      PTB_RGS12; Regulator of G-protein signaling 12 Phosphotyrosine-binding (PTB) PH-like fold
      cd17136
      Location:9621031
      RBD1_RGS12; Ras-binding domain (RBD) 1 of regulator of G protein signaling 12 (RGS12)
      pfam02188
      Location:11891209
      GoLoco; GoLoco motif
      pfam16611
      Location:11061180
      RGS12_us2; Unstructured region between RBD and GoLoco
      pfam16612
      Location:12381361
      RGS12_usC; C-terminal unstructured region of RGS12
      pfam16613
      Location:836949
      RGS12_us1; Unstructured region of RGS12
      cl28922
      Location:10321104
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
    6. XM_006504125.5XP_006504188.1  regulator of G-protein signaling 12 isoform X5

      UniProtKB/TrEMBL
      D3Z0G7
      Conserved Domains (7) summary
      cd08742
      Location:90204
      RGS_RGS12; Regulator of G protein signaling (RGS) domain found in the RGS12 protein
      cd17136
      Location:336405
      RBD1_RGS12; Ras-binding domain (RBD) 1 of regulator of G protein signaling 12 (RGS12)
      pfam02188
      Location:563583
      GoLoco; GoLoco motif
      pfam16611
      Location:480554
      RGS12_us2; Unstructured region between RBD and GoLoco
      pfam16612
      Location:612735
      RGS12_usC; C-terminal unstructured region of RGS12
      pfam16613
      Location:210323
      RGS12_us1; Unstructured region of RGS12
      cl28922
      Location:406478
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
    7. XM_030254812.2XP_030110672.1  regulator of G-protein signaling 12 isoform X7

      UniProtKB/TrEMBL
      D3Z0G7
      Conserved Domains (7) summary
      smart00390
      Location:387408
      GoLoco; LGN motif, putative GEFs specific for G-alpha GTPases
      cd17136
      Location:161230
      RBD1_RGS12; Ras-binding domain (RBD) 1 of regulator of G protein signaling 12 (RGS12)
      pfam16611
      Location:305379
      RGS12_us2; Unstructured region between RBD and GoLoco
      pfam16612
      Location:437560
      RGS12_usC; C-terminal unstructured region of RGS12
      pfam16613
      Location:35148
      RGS12_us1; Unstructured region of RGS12
      cl02565
      Location:129
      RGS; Regulator of G protein signaling (RGS) domain superfamily
      cl28922
      Location:231303
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
    8. XM_006504126.5XP_006504189.1  regulator of G-protein signaling 12 isoform X6

      UniProtKB/TrEMBL
      D3Z0G5, D3Z0G7
      Related
      ENSMUSP00000109924.2, ENSMUST00000114285.8
      Conserved Domains (7) summary
      cd08742
      Location:68182
      RGS_RGS12; Regulator of G protein signaling (RGS) domain found in the RGS12 protein
      cd17136
      Location:314383
      RBD1_RGS12; Ras-binding domain (RBD) 1 of regulator of G protein signaling 12 (RGS12)
      pfam02188
      Location:541561
      GoLoco; GoLoco motif
      pfam16611
      Location:458532
      RGS12_us2; Unstructured region between RBD and GoLoco
      pfam16612
      Location:590713
      RGS12_usC; C-terminal unstructured region of RGS12
      pfam16613
      Location:188301
      RGS12_us1; Unstructured region of RGS12
      cl28922
      Location:384456
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

    RNA

    1. XR_003955711.1 RNA Sequence

    2. XR_004942564.1 RNA Sequence

    3. XR_004942565.1 RNA Sequence