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    Cog3 Component of oligomeric golgi complex 3 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33562, updated on 9-Dec-2024

    Summary

    Official Symbol
    Cog3provided by FlyBase
    Official Full Name
    Component of oligomeric golgi complex 3provided by FlyBase
    Primary source
    FLYBASE:FBgn0031536
    Locus tag
    Dmel_CG3248
    See related
    AllianceGenome:FB:FBgn0031536
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG 3248; CG3248; COG3; dCOG3; Dmel\CG3248; SEC34
    Summary
    Involved in dsRNA transport and male meiosis cytokinesis. Part of Golgi transport complex. Is expressed in several structures, including adult head; embryonic proventriculus; gland; and spermatozoon. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation type II. Orthologous to human COG3 (component of oligomeric golgi complex 3). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See Cog3 in Genome Data Viewer
    Location:
    23F3-23F3; 2-10 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (3453697..3457064, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (3453697..3457064, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Sorting nexin 1 Neighboring gene uncharacterized protein Neighboring gene Secretory 5 Neighboring gene uncharacterized protein Neighboring gene male-specific lethal 2 Neighboring gene mir-4971 stem loop

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in Golgi organization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in Golgi organization ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in intra-Golgi vesicle-mediated transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in intra-Golgi vesicle-mediated transport ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in male meiosis cytokinesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of Golgi transport complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of Golgi transport complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of Golgi transport complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in cis-Golgi network IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    component of oligomeric golgi complex 3
    Names
    CG3248-PA
    Cog3-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      3453697..3457064 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_134935.3NP_608779.1  component of oligomeric golgi complex 3 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608779.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q961G1, Q9VQQ8
      Related
      FBpp0077262
      Conserved Domains (1) summary
      pfam04136
      Location:117261
      Sec34; Sec34-like family