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    l(3)L1231 lethal (3) L1231 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41776, updated on 9-Dec-2024

    Summary

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    Official Symbol
    l(3)L1231provided by FlyBase
    Official Full Name
    lethal (3) L1231provided by FlyBase
    Primary source
    FLYBASE:FBgn0086686
    Locus tag
    Dmel_CG7832
    See related
    AllianceGenome:FB:FBgn0086686
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BEST:LD14744; CG7832; Dmel\CG7832; LD14744
    Summary
    Involved in gravitaxis. Predicted to be active in nucleus. Is expressed in organism; wing hinge primordium; and wing pouch. Orthologous to human INO80D (INO80 complex subunit D). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See l(3)L1231 in Genome Data Viewer
    Location:
    88C10-88C10; 3-55 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (14642672..14655716, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (10468394..10481438, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Histone H4 replacement Neighboring gene uncharacterized protein Neighboring gene Cadherin 88C Neighboring gene uncharacterized protein Neighboring gene Hexamethylene bisacetamide inducible Neighboring gene Rad17

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gravitaxis in Drosophila melanogaster: a forward genetic screen. Armstrong JD, et al. Genes Brain Behav, 2006 Apr. PMID 16594976
    2. A computational and experimental approach toward a priori identification of alternatively spliced exons. Philipps DL, et al. RNA, 2004 Dec. PMID 15525709, Free PMC Article
    3. Spaceflight-related suboptimal conditions can accentuate the altered gravity response of Drosophila transcriptome. Herranz R, et al. Mol Ecol, 2010 Oct. PMID 20819157
    4. A screen identifying genes responsive to Dpp and Wg signaling in the Drosophila developing wing. Hadar N, et al. Gene, 2012 Feb 15. PMID 22192913
    5. Mutations in many genes affect aggressive behavior in Drosophila melanogaster. Edwards AC, et al. BMC Biol, 2009 Jun 11. PMID 19519879, Free PMC Article

    See all (33) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in gravitaxis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    lethal (3) L1231
    Names
    CG7832-PA
    CG7832-PC
    CG7832-PD
    l(3)L1231-PA
    l(3)L1231-PC
    l(3)L1231-PD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      14642672..14655716 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001300399.1 → NP_001287328.1  lethal (3) L1231, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287328.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VFH4
      Conserved Domains (1) summary
      pfam13891
      Location:712 → 767
      zf-C3Hc3H; Potential DNA-binding domain

    2. NM_142122.4 → NP_650379.1  lethal (3) L1231, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650379.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VFH4
      Related
      FBpp0082434
      Conserved Domains (1) summary
      pfam13891
      Location:712 → 767
      zf-C3Hc3H; Potential DNA-binding domain

    3. NM_001260175.2 → NP_001247104.1  lethal (3) L1231, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001247104.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VFH4
      Conserved Domains (1) summary
      pfam13891
      Location:712 → 767
      zf-C3Hc3H; Potential DNA-binding domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VFH4 Q9VFH4

    Gene LinkOut

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