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    Obp83ef Odorant-binding protein 83ef [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40747, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Obp83efprovided by FlyBase
    Official Full Name
    Odorant-binding protein 83efprovided by FlyBase
    Primary source
    FLYBASE:FBgn0046876
    Locus tag
    Dmel_CG31557
    See related
    AllianceGenome:FB:FBgn0046876
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    83f; 83f-1; 83f-2; CG15583; CG31557; DmelObp83ef; Dmel\CG31557; Obp83e; OBP83e; Obp83f
    Summary
    Predicted to enable odorant binding activity. Predicted to be involved in sensory perception of smell. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Obp83ef in Genome Data Viewer
    Location:
    83D4-83D4; 3-47.5 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (6109642..6111034, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (1935364..1936756, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene gasp Neighboring gene long non-coding RNA:CR44929 Neighboring gene Odorant-binding protein 83cd Neighboring gene Odorant-binding protein 83g Neighboring gene Vacuolar H[+] ATPase 14kD subunit 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Stochastic Modeling of Gene Expression Evolution Uncovers Tissue- and Sex-Specific Properties of Expression Evolution in the Drosophila Genus. Pal S, et al. J Comput Biol, 2023 Jan. PMID 36037023, Free PMC Article
    2. "Plus-C" odorant-binding protein genes in two Drosophila species and the malaria mosquito Anopheles gambiae. Zhou JJ, et al. Gene, 2004 Feb 18. PMID 14960367
    3. A large family of divergent Drosophila odorant-binding proteins expressed in gustatory and olfactory sensilla. Galindo K, et al. Genetics, 2001 Nov. PMID 11729153, Free PMC Article
    4. The odorant-binding proteins of Drosophila melanogaster: annotation and characterization of a divergent gene family. Graham LA, et al. Gene, 2002 Jun 12. PMID 12119098
    5. Evolution of gene expression in the Drosophila olfactory system. Kopp A, et al. Mol Biol Evol, 2008 Jun. PMID 18296696, Free PMC Article

    See all (43) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables odorant binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables odorant binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sensory perception of chemical stimulus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in sensory perception of smell IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Odorant-binding protein 83ef
    Names
    CG31557-PA
    Obp83ef-PA
    Odorant-binding protein 83f
    pseudogene 83e

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      6109642..6111034 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_169125.3 → NP_731042.1  Odorant-binding protein 83ef [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_731042.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0JQ37, Q9VNL2
      Related
      FBpp0078267
      Conserved Domains (1) summary
      smart00708
      Location:133 → 234
      PhBP; Insect pheromone/odorant binding protein domains
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VNL2 Q9VNL2

    Gene LinkOut

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