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    CG42534 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43298, updated on 18-Sep-2024

    Summary

    Official Symbol
    CG42534provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0260487
    Locus tag
    Dmel_CG42534
    See related
    AllianceGenome:FB:FBgn0260487
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG13980; CG14264; CG6599; Dmel\CG42534
    Old locus tag
    Dmel_CG13980; Dmel_CG14264; Dmel_CG6599
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See CG42534 in Genome Data Viewer
    Location:
    97F4-97F6; 3-93 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (27340622..27372574)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (23166344..23198296)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR44287 Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR43476 Neighboring gene uncharacterized protein Neighboring gene sidestep Neighboring gene long non-coding RNA:CR45991 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Interactions

    General protein information

    Preferred Names
    uncharacterized protein
    Names
    CG42534-PC
    CG42534-PD

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      27340622..27372574
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143303.3 → NP_651560.2  uncharacterized protein Dmel_CG42534, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651560.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VB40
      Conserved Domains (4) summary
      cd00204
      Location:345 → 468
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:319 → 412
      Ank_2; Ankyrin repeats (3 copies)
      pfam13857
      Location:214 → 269
      Ank_5; Ankyrin repeats (many copies)
      sd00045
      Location:381 → 412
      ANK; ANK repeat [structural motif]
    2. NM_001260404.1 → NP_001247333.1  uncharacterized protein Dmel_CG42534, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001247333.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4K794
      Conserved Domains (3) summary
      cd00204
      Location:220 → 343
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:194 → 287
      Ank_2; Ankyrin repeats (3 copies)
      sd00045
      Location:256 → 287
      ANK; ANK repeat [structural motif]
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