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    cbpD chitin-binding protein CbpD [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 877771, updated on 11-Sep-2024

    Summary

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    Gene symbol
    cbpD
    Gene description
    chitin-binding protein CbpD
    Locus tag
    PA0852
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (930653..931822, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene oxidoreductase Neighboring gene fumarate hydratase Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. LasB and CbpD Virulence Factors of Pseudomonas aeruginosa Carry Multiple Post-Translational Modifications on Their Lysine Residues. Gaviard C, et al. J Proteome Res, 2019 Mar 1. PMID 30672296
    2. Identification of a chitin-binding protein secreted by Pseudomonas aeruginosa. Folders J, et al. J Bacteriol, 2000 Mar. PMID 10671445, Free PMC Article
    3. Mep72, a metzincin protease that is preferentially secreted by biofilms of Pseudomonas aeruginosa. Passmore IJ, et al. J Bacteriol, 2015 Feb 15. PMID 25488299, Free PMC Article
    4. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    5. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Function Evidence Code Pubs
    enables chitin binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within protein secretion by the type II secretion system IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within protein transport by the Sec complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    chitin-binding protein CbpD
    NP_249543.1
    • Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      930653..931822 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_249543.1 chitin-binding protein CbpD [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_249543.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0X9QXD6
      Conserved Domains (1) summary
      COG3397
      Location:21 → 309
      COG3397; Predicted carbohydrate-binding protein, contains CBM5 and CBM33 domains [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9I589.1

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