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    pslC biofilm formation protein PslC [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 878103, updated on 14-Nov-2024

    Summary

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    Gene symbol
    pslC
    Gene description
    biofilm formation protein PslC
    Locus tag
    PA2233
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (2456569..2457480)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene biofilm formation protein PslA Neighboring gene biofilm formation protein PslB Neighboring gene biofilm formation protein PslD Neighboring gene biofilm formation protein PslE Neighboring gene biofilm formation protein PslF

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Biosynthesis of the Pseudomonas aeruginosa Extracellular Polysaccharides, Alginate, Pel, and Psl. Franklin MJ, et al. Front Microbiol, 2011. PMID 21991261, Free PMC Article
    2. Genetic and biochemical analyses of the Pseudomonas aeruginosa Psl exopolysaccharide reveal overlapping roles for polysaccharide synthesis enzymes in Psl and LPS production. Byrd MS, et al. Mol Microbiol, 2009 Aug. PMID 19659934, Free PMC Article
    3. The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics. Cantarel BL, et al. Nucleic Acids Res, 2009 Jan. PMID 18838391, Free PMC Article
    4. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    5. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Function Evidence Code Pubs
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within polysaccharide biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within single-species biofilm formation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    biofilm formation protein PslC
    NP_250923.1
    • Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      2456569..2457480
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_250923.1 biofilm formation protein PslC [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_250923.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q9I1N6
      Conserved Domains (1) summary
      COG1216
      Location:1 → 270
      GT2; Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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