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    pslI biofilm formation protein PslI [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 882276, updated on 14-Nov-2024

    Summary

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    Gene symbol
    pslI
    Gene description
    biofilm formation protein PslI
    Locus tag
    PA2239
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (2463996..2465099)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene biofilm formation protein PslE Neighboring gene biofilm formation protein PslF Neighboring gene biofilm formation protein PslG Neighboring gene biofilm formation protein PslH Neighboring gene biofilm formation protein PslJ Neighboring gene biofilm formation protein PslL

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and biochemical analyses of the Pseudomonas aeruginosa Psl exopolysaccharide reveal overlapping roles for polysaccharide synthesis enzymes in Psl and LPS production. Byrd MS, et al. Mol Microbiol, 2009 Aug. PMID 19659934, Free PMC Article
    2. The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics. Cantarel BL, et al. Nucleic Acids Res, 2009 Jan. PMID 18838391, Free PMC Article
    3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Function Evidence Code Pubs
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within polysaccharide biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within single-species biofilm formation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    biofilm formation protein PslI
    NP_250929.1
    • Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      2463996..2465099
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_250929.1 biofilm formation protein PslI [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_250929.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5E5QSZ3
      Conserved Domains (1) summary
      cd03809
      Location:2 → 361
      GT4_MtfB-like; glycosyltransferases MtfB, WbpX, and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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