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    2310016D23Rik RIKEN cDNA 2310016D23 gene [ Mus musculus (house mouse) ]

    Gene ID: 76443, updated on 17-Aug-2024

    Summary

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    Official Symbol
    2310016D23Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 2310016D23 geneprovided by MGI
    Primary source
    MGI:MGI:1923693
    See related
    AllianceGenome:MGI:1923693
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Biased expression in thymus adult (RPKM 1.2), mammary gland adult (RPKM 0.2) and 3 other tissues See more
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    Genomic context

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    See 2310016D23Rik in Genome Data Viewer
    Location:
    1 C2; 1 30.54 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (60817620..60842947)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (60778461..60803769)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4A, pseudogene 4 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:60803123-60803306 Neighboring gene CD28 antigen Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:60833855-60834049 Neighboring gene STARR-seq mESC enhancer starr_01074 Neighboring gene STARR-seq mESC enhancer starr_01075 Neighboring gene predicted gene 11609 Neighboring gene STARR-seq mESC enhancer starr_01076 Neighboring gene mortality factor 4 like 2 pseudogene Neighboring gene STARR-seq mESC enhancer starr_01077 Neighboring gene STARR-seq mESC enhancer starr_01078 Neighboring gene STARR-seq mESC enhancer starr_01079 Neighboring gene predicted gene, 38137

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
    2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
    3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      60817620..60842947
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_004936113.1 RNA Sequence

    2. XR_004936114.1 RNA Sequence

    3. XR_004936115.1 RNA Sequence

    4. XR_004936116.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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