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    SGM1 Sgm1p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 853598, updated on 9-Dec-2024

    Summary

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    Official Symbol
    SGM1
    Official Full Name
    Sgm1p
    Primary source
    SGD:S000003895
    Locus tag
    YJR134C
    See related
    AllianceGenome:SGD:S000003895; FungiDB:YJR134C; VEuPathDB:YJR134C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in Golgi apparatus. Orthologous to human TMF1 (TATA element modulatory factor 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See SGM1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    1
    Sequence:
    Chromosome: X; NC_001142.9 (673729..675852, complement)

    Chromosome X - NC_001142.9Genomic Context describing neighboring genes Neighboring gene Nmd5p Neighboring gene xanthine phosphoribosyltransferase Neighboring gene Mcm22p Neighboring gene protein transporter TIM8

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001142.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus HDA PubMed 
    is_active_in Golgi apparatus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Sgm1p
    NP_012668.3
    • hypothetical protein; required for wild-type growth rate on galactose and mannose; localizes to COPI coated vesicles and the Golgi apparatus

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001142.9 Reference assembly

      Range
      673729..675852 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001181792.3 → NP_012668.3  TPA: Sgm1p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_012668.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VWV2, P47166
      UniProtKB/TrEMBL
      A6ZQ89, B3LQL6, B5VLS3, C7GM79, N1P8X6
      Conserved Domains (2) summary
      TIGR02168
      Location:122 → 438
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam12325
      Location:585 → 693
      TMF_TATA_bd; TATA element modulatory factor 1 TATA binding
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P47166.1

    Gene LinkOut

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