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    alphaTub84D alpha-Tubulin at 84D [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40904, updated on 9-Dec-2024

    Summary

    Official Symbol
    alphaTub84Dprovided by FlyBase
    Official Full Name
    alpha-Tubulin at 84Dprovided by FlyBase
    Primary source
    FLYBASE:FBgn0003885
    Locus tag
    Dmel_CG2512
    See related
    AllianceGenome:FB:FBgn0003885
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    3t; 84D; ALPHA 84D; alpha-tub; alpha-Tub; alpha-tub84D; alpha-Tub84D; alpha-tubulin; alpha3; alpha3t; alpha84D; alphaTub; alphaTUB; alphaTub3; alphaTub84; alphaTUB84D; AlphaTub84D; aTub84D; CG2512; D.m.ALPHA-84D; Dmel\CG2512; DTA4; FBgn0003884; T; Tub; Tub1A
    Summary
    Enables myosin binding activity. Involved in sperm axoneme assembly. Located in perinuclear region of cytoplasm. Is expressed in several structures, including embryonic/larval esophagus; neuron projection bundle of larval ventral nerve cord; ovary; presumptive embryonic/larval central nervous system; and spermatozoon. Human ortholog(s) of this gene implicated in keratoconus; lissencephaly; lissencephaly 3; microcephaly; and visual epilepsy. Orthologous to several human genes including TUBA3C (tubulin alpha 3c) and TUBA3D (tubulin alpha 3d). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See alphaTub84D in Genome Data Viewer
    Location:
    84D9-84D9; 3-48 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (7530753..7532732)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (3356475..3358454)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene alpha-Esterase-6 Neighboring gene pseudo Neighboring gene Rtnl2 Neighboring gene alpha-Esterase-5 Neighboring gene alpha-Esterase-4 Neighboring gene antisense RNA:CR46128

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables GTP binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables myosin binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables structural constituent of cytoskeleton IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables structural constituent of cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in microtubule cytoskeleton organization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in microtubule-based process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in mitotic cell cycle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in sperm axoneme assembly IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in spermatogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in microtubule IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in microtubule IEA
    Inferred from Electronic Annotation
    more info
     
    located_in perinuclear region of cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    alpha-Tubulin at 84D
    Names
    CG2512-PA
    Tubulin-alpha3
    alpha tubulin
    alpha-Tubulin
    alpha-tubulin84D
    alphaT
    alphaTub84D-PA
    alphaTubulin 84D
    alphatubulin
    tubulin
    tubulin alpha-3 chain
    tubulin alpha3
    tubulin at 84D

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      7530753..7532732
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079540.6NP_524264.1  alpha-Tubulin at 84D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524264.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P06605, Q9VIB8
      UniProtKB/TrEMBL
      K7WKV5
      Related
      FBpp0081062
      Conserved Domains (1) summary
      PTZ00335
      Location:1439
      PTZ00335; tubulin alpha chain; Provisional