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    Obp56c Odorant-binding protein 56c [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 170882, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Obp56cprovided by FlyBase
    Official Full Name
    Odorant-binding protein 56cprovided by FlyBase
    Primary source
    FLYBASE:FBgn0046879
    Locus tag
    Dmel_CG30128
    See related
    AllianceGenome:FB:FBgn0046879
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    56c; CG15129; CG30128; DmelObp56c; Dmel\CG30128; OBP56c
    Summary
    Predicted to enable odorant binding activity. Predicted to be involved in sensory perception of smell. Predicted to be located in extracellular region. Is expressed in antenna; antennal sense organ; anterior wing margin; and embryonic antennal sense organ. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Obp56c in Genome Data Viewer
    Location:
    56E2-56E2; 2-90 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (19699995..19701124, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (15587500..15588629, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Odorant-binding protein 56a Neighboring gene Odorant-binding protein 56b Neighboring gene Odorant-binding protein 56d Neighboring gene antisense RNA:CR44509 Neighboring gene Odorant-binding protein 56e

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables odorant binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables odorant binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sensory perception of chemical stimulus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in sensory perception of smell IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Odorant-binding protein 56c
    Names
    CG30128-PB
    CG30128-PC
    Obp56c-PB
    Obp56c-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      19699995..19701124 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_166374.4 → NP_725925.3  Odorant-binding protein 56c, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_725925.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1ZBP8, A9QHI0, D0IQB3
      Conserved Domains (1) summary
      pfam01395
      Location:115 → 185
      PBP_GOBP; PBP/GOBP family

    2. NM_206180.2 → NP_995902.1  Odorant-binding protein 56c, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_995902.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1ZBP9, A9QHI0
      Conserved Domains (1) summary
      pfam01395
      Location:125 → 195
      PBP_GOBP; PBP/GOBP family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A1ZBP8 A1ZBP8
    A1ZBP9 A1ZBP9

    Gene LinkOut

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