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    CG7368 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39301, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG7368provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0036179
    Locus tag
    Dmel_CG7368
    See related
    AllianceGenome:FB:FBgn0036179
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG7368
    Summary
    Predicted to be involved in negative regulation of transcription by RNA polymerase II and positive regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG7368 in Genome Data Viewer
    Location:
    68C14-68C15; 3-36 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (11597202..11605374)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (11590302..11598474)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45672 Neighboring gene long non-coding RNA:CR45442 Neighboring gene long non-coding RNA:CR45671 Neighboring gene long non-coding RNA:CR45443 Neighboring gene long non-coding RNA:CR46414 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Deubiquitinating enzyme A Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetics of alcohol consumption in Drosophila melanogaster. Fochler S, et al. Genes Brain Behav, 2017 Sep. PMID 28627812, Free PMC Article
    2. Rapid and efficient cDNA library screening by self-ligation of inverse PCR products (SLIP). Hoskins RA, et al. Nucleic Acids Res, 2005 Dec 2. PMID 16326860, Free PMC Article
    3. Identification of Drosophila gene products required for phagocytosis of Candida albicans. Stroschein-Stevenson SL, et al. PLoS Biol, 2006 Jan. PMID 16336044, Free PMC Article
    4. Screen for mitochondrial DNA copy number maintenance genes reveals essential role for ATP synthase. Fukuoh A, et al. Mol Syst Biol, 2014 Jun 21. PMID 24952591, Free PMC Article
    5. Tumour-host interactions through the lens of Drosophila. Bilder D, et al. Nat Rev Cancer, 2021 Nov. PMID 34389815, Free PMC Article

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in positive regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG7368-PB
    CG7368-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      11597202..11605374
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001043134.2 → NP_001036599.1  uncharacterized protein Dmel_CG7368, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001036599.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VTK6
      Conserved Domains (4) summary
      COG5048
      Location:356 → 412
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:358 → 378
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:412 → 434
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:370 → 395
      zf-H2C2_2; Zinc-finger double domain

    2. NM_001259793.1 → NP_001246722.1  uncharacterized protein Dmel_CG7368, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246722.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VTK6
      Conserved Domains (4) summary
      COG5048
      Location:356 → 412
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:358 → 378
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:412 → 434
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:370 → 395
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VTK6 Q9VTK6

    Gene LinkOut

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