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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_029475.2 RefSeqGene
- Range
-
5211..85020
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001320910.2 → NP_001307839.1 GA-binding protein subunit beta-1 isoform beta 1
Status: REVIEWED
- Source sequence(s)
-
AC022087
- Consensus CDS
-
CCDS32239.1
- UniProtKB/Swiss-Prot
- A8IE52, Q06545, Q06547, Q12940, Q12941, Q12942, Q8IYD0
- UniProtKB/TrEMBL
-
B7Z726
- Conserved Domains (4) summary
-
- sd00045
Location:38 → 68
- ANK; ANK repeat [structural motif]
- pfam13637
Location:10 → 58
- Ank_4; Ankyrin repeats (many copies)
- pfam12796
Location:42 → 133
- Ank_2; Ankyrin repeats (3 copies)
- pfam16566
Location:341 → 390
- CREPT; Cell-cycle alteration and expression-elevated protein in tumor
-
NM_001320915.2 → NP_001307844.1 GA-binding protein subunit beta-1 isoform 5
Status: REVIEWED
- Source sequence(s)
-
AC022087
- UniProtKB/TrEMBL
-
B7Z726
- Conserved Domains (4) summary
-
- sd00045
Location:38 → 68
- ANK; ANK repeat [structural motif]
- pfam13637
Location:10 → 58
- Ank_4; Ankyrin repeats (many copies)
- pfam12796
Location:42 → 133
- Ank_2; Ankyrin repeats (3 copies)
- pfam16566
Location:340 → 389
- CREPT; Cell-cycle alteration and expression-elevated protein in tumor
-
NM_002041.5 → NP_002032.2 GA-binding protein subunit beta-1 isoform gamma 1
See identical proteins and their annotated locations for NP_002032.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (gamma 1) uses an alternate in-frame splice site in the 3' coding region, compared to variant beta 1, resulting in a shorter isoform (gamma 1).
- Source sequence(s)
-
DA156248, U13047
- Consensus CDS
-
CCDS45258.1
- UniProtKB/TrEMBL
-
B7Z726
- Related
- ENSP00000395771.2, ENST00000429662.6
- Conserved Domains (3) summary
-
- sd00045
Location:38 → 68
- ANK; ANK repeat [structural motif]
- pfam12796
Location:42 → 133
- Ank_2; Ankyrin repeats (3 copies)
- pfam13637
Location:10 → 58
- Ank_4; Ankyrin repeats (many copies)
-
NM_005254.6 → NP_005245.2 GA-binding protein subunit beta-1 isoform beta 1
See identical proteins and their annotated locations for NP_005245.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (beta 1) encodes the longest isoform (beta 1).
- Source sequence(s)
-
AC022087, AI631183, BC036080, DA156248, U13045
- Consensus CDS
-
CCDS32239.1
- UniProtKB/Swiss-Prot
- A8IE52, Q06545, Q06547, Q12940, Q12941, Q12942, Q8IYD0
- UniProtKB/TrEMBL
-
B7Z726
- Related
- ENSP00000220429.8, ENST00000220429.12
- Conserved Domains (4) summary
-
- sd00045
Location:38 → 68
- ANK; ANK repeat [structural motif]
- pfam13637
Location:10 → 58
- Ank_4; Ankyrin repeats (many copies)
- pfam12796
Location:42 → 133
- Ank_2; Ankyrin repeats (3 copies)
- pfam16566
Location:341 → 390
- CREPT; Cell-cycle alteration and expression-elevated protein in tumor
-
NM_016654.5 → NP_057738.1 GA-binding protein subunit beta-1 isoform beta 2
See identical proteins and their annotated locations for NP_057738.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (beta 2) lacks an alternate in-frame segment, compared to variant beta 1, resulting in a shorter isoform (beta 2) that lacks a 12-amino acid serine-rich region, compared to isoform beta 1.
- Source sequence(s)
-
AC022087, AI631183, BC036080, D13317, DA156248
- Consensus CDS
-
CCDS10135.1
- UniProtKB/TrEMBL
-
B7Z726
- Related
- ENSP00000370259.3, ENST00000380877.8
- Conserved Domains (4) summary
-
- sd00045
Location:38 → 68
- ANK; ANK repeat [structural motif]
- pfam13637
Location:10 → 58
- Ank_4; Ankyrin repeats (many copies)
- pfam12796
Location:42 → 133
- Ank_2; Ankyrin repeats (3 copies)
- pfam16566
Location:329 → 378
- CREPT; Cell-cycle alteration and expression-elevated protein in tumor
-
NM_016655.5 → NP_057739.1 GA-binding protein subunit beta-1 isoform gamma 2
See identical proteins and their annotated locations for NP_057739.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (gamma 2) contains multiple differences compared to variant beta 1, resulting in a shorter isoform (gamma 2) that lacks a 12-amino acid serine-rich region, compared to isoform beta 1. Both this variant (gamma 2) and gamma 3 encode the same isoform (gamma 2), however, they differ in the 5' UTR.
- Source sequence(s)
-
DA156248, U13047, U13048
- Consensus CDS
-
CCDS10136.1
- UniProtKB/TrEMBL
-
B7Z726
- Related
- ENSP00000379728.3, ENST00000396464.7
- Conserved Domains (3) summary
-
- sd00045
Location:38 → 68
- ANK; ANK repeat [structural motif]
- pfam13637
Location:10 → 58
- Ank_4; Ankyrin repeats (many copies)
- pfam12796
Location:42 → 133
- Ank_2; Ankyrin repeats (3 copies)
-
NM_181427.4 → NP_852092.1 GA-binding protein subunit beta-1 isoform gamma 2
See identical proteins and their annotated locations for NP_852092.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (gamma 3) contains multiple differences compared to variant beta 1, resulting in a shorter isoform (gamma 2) that lacks a 12-amino acid serine-rich region, compared to isoform beta 1. Both this variant (gamma 3) and gamma 2 encode the same isoform (gamma 2), however, they differ in the 5' UTR.
- Source sequence(s)
-
DA156248, DA502761, U13048
- Consensus CDS
-
CCDS10136.1
- UniProtKB/TrEMBL
-
B7Z726
- Related
- ENSP00000351923.4, ENST00000359031.8
- Conserved Domains (3) summary
-
- sd00045
Location:38 → 68
- ANK; ANK repeat [structural motif]
- pfam13637
Location:10 → 58
- Ank_4; Ankyrin repeats (many copies)
- pfam12796
Location:42 → 133
- Ank_2; Ankyrin repeats (3 copies)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000015.10 Reference GRCh38.p14 Primary Assembly
- Range
-
50275389..50355198 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011521426.4 → XP_011519728.1 GA-binding protein subunit beta-1 isoform X7
See identical proteins and their annotated locations for XP_011519728.1
- UniProtKB/TrEMBL
-
B7Z726
- Conserved Domains (4) summary
-
- sd00045
Location:38 → 68
- ANK; ANK repeat [structural motif]
- pfam13637
Location:10 → 58
- Ank_4; Ankyrin repeats (many copies)
- pfam12796
Location:42 → 133
- Ank_2; Ankyrin repeats (3 copies)
- pfam16566
Location:328 → 377
- CREPT; Cell-cycle alteration and expression-elevated protein in tumor
-
XM_024449886.2 → XP_024305654.1 GA-binding protein subunit beta-1 isoform X4
- UniProtKB/TrEMBL
-
B7Z726
- Conserved Domains (4) summary
-
- sd00045
Location:38 → 68
- ANK; ANK repeat [structural motif]
- pfam13637
Location:10 → 58
- Ank_4; Ankyrin repeats (many copies)
- pfam12796
Location:42 → 133
- Ank_2; Ankyrin repeats (3 copies)
- pfam16566
Location:340 → 389
- CREPT; Cell-cycle alteration and expression-elevated protein in tumor
-
XM_017022053.3 → XP_016877542.1 GA-binding protein subunit beta-1 isoform X6
- UniProtKB/TrEMBL
-
B7Z726
- Conserved Domains (4) summary
-
- sd00045
Location:38 → 68
- ANK; ANK repeat [structural motif]
- pfam13637
Location:10 → 58
- Ank_4; Ankyrin repeats (many copies)
- pfam12796
Location:42 → 133
- Ank_2; Ankyrin repeats (3 copies)
- pfam16566
Location:329 → 378
- CREPT; Cell-cycle alteration and expression-elevated protein in tumor
-
XM_024449883.2 → XP_024305651.1 GA-binding protein subunit beta-1 isoform X2
- UniProtKB/TrEMBL
-
B7Z726
- Conserved Domains (3) summary
-
- cd00204
Location:39 → 161
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- sd00045
Location:43 → 73
- ANK; ANK repeat [structural motif]
- cl25742
Location:328 → 394
- ERM; Ezrin/radixin/moesin family
-
XM_047432337.1 → XP_047288293.1 GA-binding protein subunit beta-1 isoform X5
- UniProtKB/TrEMBL
-
B7Z726
-
XM_005254274.5 → XP_005254331.1 GA-binding protein subunit beta-1 isoform X3
See identical proteins and their annotated locations for XP_005254331.1
- UniProtKB/Swiss-Prot
- A8IE52, Q06545, Q06547, Q12940, Q12941, Q12942, Q8IYD0
- UniProtKB/TrEMBL
-
B7Z726
- Conserved Domains (4) summary
-
- sd00045
Location:38 → 68
- ANK; ANK repeat [structural motif]
- pfam13637
Location:10 → 58
- Ank_4; Ankyrin repeats (many copies)
- pfam12796
Location:42 → 133
- Ank_2; Ankyrin repeats (3 copies)
- pfam16566
Location:341 → 390
- CREPT; Cell-cycle alteration and expression-elevated protein in tumor
-
XM_047432336.1 → XP_047288292.1 GA-binding protein subunit beta-1 isoform X1
- UniProtKB/TrEMBL
-
B7Z726
Alternate T2T-CHM13v2.0
Genomic
-
NC_060939.1 Alternate T2T-CHM13v2.0
- Range
-
48083628..48163356 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054377661.1 → XP_054233636.1 GA-binding protein subunit beta-1 isoform X7
- UniProtKB/TrEMBL
-
B7Z726
-
XM_054377658.1 → XP_054233633.1 GA-binding protein subunit beta-1 isoform X4
- UniProtKB/TrEMBL
-
B7Z726
-
XM_054377660.1 → XP_054233635.1 GA-binding protein subunit beta-1 isoform X6
- UniProtKB/TrEMBL
-
B7Z726
-
XM_054377656.1 → XP_054233631.1 GA-binding protein subunit beta-1 isoform X2
- UniProtKB/TrEMBL
-
B7Z726
-
XM_054377659.1 → XP_054233634.1 GA-binding protein subunit beta-1 isoform X5
- UniProtKB/TrEMBL
-
B7Z726
-
XM_054377657.1 → XP_054233632.1 GA-binding protein subunit beta-1 isoform X3
- UniProtKB/Swiss-Prot
- A8IE52, Q06545, Q06547, Q12940, Q12941, Q12942, Q8IYD0
- UniProtKB/TrEMBL
-
B7Z726
-
XM_054377655.1 → XP_054233630.1 GA-binding protein subunit beta-1 isoform X1
- UniProtKB/TrEMBL
-
B7Z726