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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_029121.1 RefSeqGene
- Range
-
5003..44262
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001410928.1 → NP_001397857.1 telomeric repeat-binding factor 1 isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) represents the longest transcript and encodes the longest isoform (3).
- Source sequence(s)
-
AC022893
- Consensus CDS
-
CCDS94314.1
- UniProtKB/TrEMBL
- A0A7I2YQE7, A8K914
- Related
- ENSP00000503453.1, ENST00000678860.1
-
NM_001413364.1 → NP_001400293.1 telomeric repeat-binding factor 1 isoform 4
Status: REVIEWED
- Source sequence(s)
-
AC022893
- UniProtKB/TrEMBL
-
A8K914
-
NM_001413365.1 → NP_001400294.1 telomeric repeat-binding factor 1 isoform 5
Status: REVIEWED
- Source sequence(s)
-
AC022893
-
NM_001413366.1 → NP_001400295.1 telomeric repeat-binding factor 1 isoform 6
Status: REVIEWED
- Source sequence(s)
-
AC022893
-
NM_001413367.1 → NP_001400296.1 telomeric repeat-binding factor 1 isoform 7
Status: REVIEWED
- Source sequence(s)
-
AC022893
-
NM_001413368.1 → NP_001400297.1 telomeric repeat-binding factor 1 isoform 8
Status: REVIEWED
- Source sequence(s)
-
AC022893
-
NM_001413369.1 → NP_001400298.1 telomeric repeat-binding factor 1 isoform 9
Status: REVIEWED
- Source sequence(s)
-
AC022893
- UniProtKB/TrEMBL
-
A0A7I2V5E0
-
NM_001413370.1 → NP_001400299.1 telomeric repeat-binding factor 1 isoform 10
Status: REVIEWED
- Source sequence(s)
-
AC022893
- UniProtKB/TrEMBL
-
A8K914
-
NM_001413371.1 → NP_001400300.1 telomeric repeat-binding factor 1 isoform 11
Status: REVIEWED
- Source sequence(s)
-
AC022893
- UniProtKB/TrEMBL
- A0A7I2V5T5, A8K914
- Related
- ENSP00000504760.1, ENST00000679115.1
-
NM_001413372.1 → NP_001400301.1 telomeric repeat-binding factor 1 isoform 12
Status: REVIEWED
- Source sequence(s)
-
AC022893
- UniProtKB/TrEMBL
-
A8K914
-
NM_001413373.1 → NP_001400302.1 telomeric repeat-binding factor 1 isoform 13
Status: REVIEWED
- Source sequence(s)
-
AC022893
- UniProtKB/TrEMBL
-
A8K914
-
NM_001413374.1 → NP_001400303.1 telomeric repeat-binding factor 1 isoform 14
Status: REVIEWED
- Source sequence(s)
-
AC022893
- UniProtKB/TrEMBL
-
E7EWM7
-
NM_003218.4 → NP_003209.2 telomeric repeat-binding factor 1 isoform 2
See identical proteins and their annotated locations for NP_003209.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon, compared to variant 1, resulting in a shorter protein (isoform 2), compared to isoform 1.
- Source sequence(s)
-
AC022893, AI218408, BC029378, BF056993, CX788828, DA658766
- Consensus CDS
-
CCDS6210.1
- UniProtKB/TrEMBL
-
A8K914
- Related
- ENSP00000276602.6, ENST00000276602.10
- Conserved Domains (2) summary
-
- cd11660
Location:361 → 409
- SANT_TRF; Telomere repeat binding factor-like DNA-binding domains of the SANT/myb-like family
- cd00280
Location:76 → 264
- TRFH; Telomeric Repeat binding Factor or TTAGGG Repeat binding Factor, central (dimerization) domain Homology; TRFH. Telomeres are protein/DNA complexes that make up the physical ends of eukaryotic linear chromosomes and are essential for chromosome stability, ...
-
NM_017489.3 → NP_059523.2 telomeric repeat-binding factor 1 isoform 1
See identical proteins and their annotated locations for NP_059523.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes isoform 1.
- Source sequence(s)
-
AC022893, AI218408, BF056993, CX788828, DA658766, U40705
- Consensus CDS
-
CCDS6211.1
- UniProtKB/Swiss-Prot
- A7XP29, P54274, Q15553, Q8NHT6, Q93029
- UniProtKB/TrEMBL
-
A8K914
- Related
- ENSP00000276603.5, ENST00000276603.10
- Conserved Domains (3) summary
-
- smart00717
Location:380 → 429
- SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
- cd11660
Location:381 → 429
- SANT_TRF; Telomere repeat binding factor-like DNA-binding domains of the SANT/myb-like family
- cd00280
Location:76 → 264
- TRFH; Telomeric Repeat binding Factor or TTAGGG Repeat binding Factor, central (dimerization) domain Homology; TRFH. Telomeres are protein/DNA complexes that make up the physical ends of eukaryotic linear chromosomes and are essential for chromosome stability, ...
RNA
-
NR_182138.1 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC022893
- Related
-
ENST00000676483.1
-
NR_182139.1 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC022893
-
NR_182140.1 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC022893
- Related
-
ENST00000678997.1
-
NR_182141.1 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC022893
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000008.11 Reference GRCh38.p14 Primary Assembly
- Range
-
73008864..73048123
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060932.1 Alternate T2T-CHM13v2.0
- Range
-
73437901..73477172
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)