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    cspF cold shock-like protein CspF [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946090, updated on 3-Dec-2024

    Summary

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    Official Symbol
    cspF
    Official Full Name
    cold shock-like protein CspF
    Primary source
    ECOCYC:EG12205
    Locus tag
    b1558
    See related
    ASAP:ABE-0005205
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1552
    Summary
    CspF belongs to the family of cold shock proteins . [More information is available at EcoCyc: EG12205].
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    Genomic context

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    Sequence:
    NC_000913.3 (1641855..1642067)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative zinc-binding protein YnfU Neighboring gene cold shock-like protein CspB Neighboring gene protein YnfS Neighboring gene putative antitermination protein Q

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The CspA family in Escherichia coli: multiple gene duplication for stress adaptation. Yamanaka K, et al. Mol Microbiol, 1998 Jan. PMID 9484881
    2. Family of the major cold-shock protein, CspA (CS7.4), of Escherichia coli, whose members show a high sequence similarity with the eukaryotic Y-box binding proteins. Lee SJ, et al. Mol Microbiol, 1994 Mar. PMID 8022261
    3. Applications of nucleic acid chaperone activity of CspA and its homologues. Phadtare S, et al. J Mol Microbiol Biotechnol, 2009. PMID 19556744
    4. Cold shock proteins aid coupling of transcription and translation in bacteria. El-Sharoud WM, et al. Sci Prog, 2007. PMID 17455763, Free PMC Article
    5. Folding chromosomes in bacteria: examining the role of Csp proteins and other small nucleic acid-binding proteins. Trun N, et al. Curr Top Dev Biol, 2003. PMID 12959196

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables nucleic acid binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of gene expression IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    cold shock-like protein CspF

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1641855..1642067
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416076.1 cold shock-like protein CspF [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416076.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2Y0DQQ4
      Conserved Domains (1) summary
      PRK15463
      Location:1 → 70
      PRK15463; cold shock-like protein CspF; Provisional
    Nucleotide Protein
    Heading Accession and Version

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