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    yfhL putative 4Fe-4S cluster-containing protein YfhL [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947031, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yfhL
    Official Full Name
    putative 4Fe-4S cluster-containing protein YfhL
    Primary source
    ECOCYC:G7346
    Locus tag
    b2562
    See related
    ASAP:ABE-0008431
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2560
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    Genomic context

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    Sequence:
    NC_000913.3 (2699663..2699923)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene phosphatidylglycerophosphatase C Neighboring gene putative DNA-binding transcriptional regulator YfhH Neighboring gene toxic peptide ShoB Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A comprehensive library of fluorescent transcriptional reporters for Escherichia coli. Zaslaver A, et al. Nat Methods, 2006 Aug. PMID 16862137
    2. Identification and Characterization of Genes Required for 5-Hydroxyuridine Synthesis in Bacillus subtilis and Escherichia coli tRNA. Lauhon CT. J Bacteriol, 2019 Oct 15. PMID 31358606, Free PMC Article
    3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    4. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables 4 iron, 4 sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within tRNA wobble base modification IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    putative 4Fe-4S cluster-containing protein YfhL

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2699663..2699923
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417057.1 putative 4Fe-4S cluster-containing protein YfhL [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417057.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A793CGG4
      Conserved Domains (1) summary
      NF033683
      Location:1 → 80
      di_4Fe-4S_YfhL; YfhL family 4Fe-4S dicluster ferredoxin
    Nucleotide Protein
    Heading Accession and Version

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