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    yjjB putative succinate exporter YjjB [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948811, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yjjB
    Official Full Name
    putative succinate exporter YjjB
    Primary source
    ECOCYC:EG11215
    Locus tag
    b4363
    See related
    ASAP:ABE-0014310
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4353
    Summary
    The original sequence had a C-terminal frameshift extending YjjB, but homology analysis suggests that the extension is artifactual. [More information is available at EcoGene: EG11215]. A YjjB-LacZ fusion protein was shown to be expressed in vivo . [More information is available at EcoCyc: EG11215].
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    Genomic context

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    Sequence:
    NC_000913.3 (4601624..4602097, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA replication protein DnaC Neighboring gene primosomal protein DnaT Neighboring gene putative succinate exporter YjjP Neighboring gene DNA-binding transcriptional repressor YjjQ Neighboring gene DNA-binding transcriptional regulator BglJ Neighboring gene ferric-siderophore reductase FhuF

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Escherichia coli yjjPB genes encode a succinate transporter important for succinate production. Fukui K, et al. Biosci Biotechnol Biochem, 2017 Sep. PMID 28673128
    2. Combined systems approaches reveal highly plastic responses to antimicrobial peptide challenge in Escherichia coli. Kozlowska J, et al. PLoS Pathog, 2014 May. PMID 24789011, Free PMC Article
    3. Operon structure of dnaT and dnaC genes essential for normal and stable DNA replication of Escherichia coli chromosome. Masai H, et al. J Biol Chem, 1988 Oct 15. PMID 2844800
    4. Cell-free complements in vivo expression of the E. coli membrane proteome. Savage DF, et al. Protein Sci, 2007 May. PMID 17456747, Free PMC Article
    5. Inferring gene function from evolutionary change in signatures of translation efficiency. Krisko A, et al. Genome Biol, 2014 Mar 3. PMID 24580753, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within response to osmotic stress IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to peptide IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to peptide IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in succinate transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in succinate transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within succinate transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative succinate exporter YjjB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4601624..4602097 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418783.2 putative succinate exporter YjjB [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418783.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376FTB8
      Conserved Domains (1) summary
      PRK09917
      Location:1 → 157
      PRK09917; threonine/serine exporter
    Nucleotide Protein
    Heading Accession and Version

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