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    yneE PF01062 family inner membrane protein YneE [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946188, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yneE
    Official Full Name
    PF01062 family inner membrane protein YneE
    Primary source
    ECOCYC:G6807
    Locus tag
    b1520
    See related
    ASAP:ABE-0005072
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1513
    Summary
    A yneE mutation leads to a defect in swarming, but not swimming motility . [More information is available at EcoCyc: G6807].
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    Genomic context

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    Sequence:
    NC_000913.3 (1608108..1609022, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Neighboring gene trans-aconitate 2-methyltransferase Neighboring gene tagaturonate reductase Neighboring gene putative diguanylate cyclase DgcF

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. luxS-dependent gene regulation in Escherichia coli K-12 revealed by genomic expression profiling. Wang L, et al. J Bacteriol, 2005 Dec. PMID 16321939, Free PMC Article
    2. Genome-wide screening of genes required for swarming motility in Escherichia coli K-12. Inoue T, et al. J Bacteriol, 2007 Feb. PMID 17122336, Free PMC Article
    3. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
    4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables chloride channel activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within bacterial-type flagellum-dependent swarming motility IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in chloride transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in monoatomic ion transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    PF01062 family inner membrane protein YneE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1608108..1609022 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416037.2 PF01062 family inner membrane protein YneE [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416037.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A3L5H7V4
      Conserved Domains (1) summary
      COG3781
      Location:1 → 304
      YneE; Predicted membrane chloride channel, bestrophin family [Inorganic ion transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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