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    POM34 Pom34p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 850705, updated on 9-Dec-2024

    Summary

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    Official Symbol
    POM34
    Official Full Name
    Pom34p
    Primary source
    SGD:S000004008
    Locus tag
    YLR018C
    See related
    AllianceGenome:SGD:S000004008; FungiDB:YLR018C; VEuPathDB:YLR018C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Predicted to be a structural constituent of nuclear pore. Involved in nuclear pore organization; protein import into nucleus; and spindle pole body duplication. Located in nuclear outer membrane. Part of nuclear pore transmembrane ring. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See POM34 in Genome Data Viewer
    Location:
    chromosome: XII
    Exon count:
    1
    Sequence:
    Chromosome: XII; NC_001144.5 (178707..179606, complement)

    Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene Pml1p Neighboring gene S-methyl-5-thioadenosine phosphorylase Neighboring gene putative phosphatase Neighboring gene sterol esterase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001144.5

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. SSA4 Mediates Cd Tolerance via Activation of the Cis Element of VHS1 in Yeast and Enhances Cd Tolerance in Chinese Cabbage. Zheng H, et al. Int J Mol Sci, 2024 Oct 14. PMID 39456809, Free PMC Article
    2. Reduction of Saccharomyces cerevisiae Pom34 protein level by SESA network is related to membrane lipid composition. Sezen B. FEMS Yeast Res, 2015 Dec. PMID 26419396
    3. The SUN protein Mps3 controls Ndc1 distribution and function on the nuclear membrane. Chen J, et al. J Cell Biol, 2014 Feb 17. PMID 24515347, Free PMC Article
    4. Distinct domains in Ndc1 mediate its interaction with the Nup84 complex and the nuclear membrane. Amm I, et al. J Cell Biol, 2023 Jun 5. PMID 37154843, Free PMC Article
    5. Integrity and function of the Saccharomyces cerevisiae spindle pole body depends on connections between the membrane proteins Ndc1, Rtn1, and Yop1. Casey AK, et al. Genetics, 2012 Oct. PMID 22798490, Free PMC Article

    See all (75) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables structural constituent of nuclear pore IC
    Inferred by Curator
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in nuclear pore organization IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in nucleocytoplasmic transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in protein import into nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in protein import into nucleus IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in spindle pole body duplication IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in spindle pole body duplication IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nuclear membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in nuclear outer membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in nuclear outer membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nuclear periphery HDA PubMed 
    part_of nuclear pore IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of nuclear pore IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of nuclear pore transmembrane ring IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of nuclear pore transmembrane ring IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of nuclear pore transmembrane ring IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Pom34p
    NP_013118.1
    • Subunit of the transmembrane ring of the nuclear pore complex (NPC); contributes to nucleocytoplasmic transport, NPC biogenesis and spindle pole body duplication

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001144.5 Reference assembly

      Range
      178707..179606 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001181905.1 → NP_013118.1  TPA: Pom34p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_013118.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VY20, E9P8U3, Q12445, Q7LGY6
      UniProtKB/TrEMBL
      A7A0S3, B3LSZ1, C7GXG4, C8ZCZ0
      Conserved Domains (1) summary
      pfam08058
      Location:40 → 188
      NPCC; Nuclear pore complex component
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q12445.1

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