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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_032912.1 RefSeqGene
- Range
-
5001..131733
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_646
mRNA and Protein(s)
-
NM_001167681.3 → NP_001161153.1 Friend leukemia integration 1 transcription factor isoform 2
See identical proteins and their annotated locations for NP_001161153.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) contains a distinct 5' UTR and uses a downstream in-frame start codon, compared to variant 1. The encoded isoform (2) has a shorter N-terminus, compared to isoform 1.
- Source sequence(s)
-
AI354789, AK300153, AP001122, DC381599
- Consensus CDS
-
CCDS53725.1
- UniProtKB/TrEMBL
-
A0A8V8TM04
- Related
- ENSP00000432950.1, ENST00000534087.3
- Conserved Domains (2) summary
-
- cd08541
Location:81 → 171
- SAM_PNT-FLI-1; Sterile alpha motif (SAM)/Pointed domain of friend leukemia integration 1 transcription activator
- smart00413
Location:247 → 330
- ETS; erythroblast transformation specific domain
-
NM_001271010.2 → NP_001257939.1 Friend leukemia integration 1 transcription factor isoform 3
See identical proteins and their annotated locations for NP_001257939.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) contains a distinct 5' UTR and 5' coding region, and uses an alternate start codon, compared to variant 1. The encoded isoform (3) has a distinct and shorter N-terminus, compared to isoform 1.
- Source sequence(s)
-
AI354789, AK313370, AP001122, DC381599, M93255
- Consensus CDS
-
CCDS59231.1
- UniProtKB/TrEMBL
-
A0A8V8TM04
- Related
- ENSP00000281428.8, ENST00000281428.12
- Conserved Domains (2) summary
-
- cd08541
Location:48 → 138
- SAM_PNT-FLI-1; Sterile alpha motif (SAM)/Pointed domain of friend leukemia integration 1 transcription activator
- smart00413
Location:214 → 297
- ETS; erythroblast transformation specific domain
-
NM_001271012.2 → NP_001257941.1 Friend leukemia integration 1 transcription factor isoform 4
See identical proteins and their annotated locations for NP_001257941.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR, lacks a portion of the 5' coding region and two alternate internal exons, and uses an alternate start codon, compared to variant 1. The encoded isoform (4) has a distinct N-terminus and is shorter than isoform 1.
- Source sequence(s)
-
AI354789, AK294279, AP001122
- Consensus CDS
-
CCDS59230.1
- UniProtKB/Swiss-Prot
-
Q01543
- Related
- ENSP00000339627.7, ENST00000344954.10
- Conserved Domains (1) summary
-
- smart00413
Location:87 → 170
- ETS; erythroblast transformation specific domain
-
NM_002017.5 → NP_002008.2 Friend leukemia integration 1 transcription factor isoform 1
See identical proteins and their annotated locations for NP_002008.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AI354789, AK313370, AP001122
- Consensus CDS
-
CCDS44768.1
- UniProtKB/Swiss-Prot
- B2R8H2, B4DFV4, B4DTC6, G3V183, Q01543, Q14319, Q92480, Q9UE07
- UniProtKB/TrEMBL
-
A0A8V8TM04
- Related
- ENSP00000433488.2, ENST00000527786.7
- Conserved Domains (2) summary
-
- cd08541
Location:114 → 204
- SAM_PNT-FLI-1; Sterile alpha motif (SAM)/Pointed domain of friend leukemia integration 1 transcription activator
- smart00413
Location:280 → 363
- ETS; erythroblast transformation specific domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000011.10 Reference GRCh38.p14 Primary Assembly
- Range
-
128685351..128813267
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017017405.2 → XP_016872894.1 Friend leukemia integration 1 transcription factor isoform X1
- UniProtKB/TrEMBL
-
A0A8V8TM04
- Conserved Domains (2) summary
-
- cd08541
Location:81 → 171
- SAM_PNT-FLI-1; Sterile alpha motif (SAM)/Pointed domain of friend leukemia integration 1 transcription activator
- smart00413
Location:247 → 330
- ETS; erythroblast transformation specific domain
-
XM_017017406.2 → XP_016872895.1 Friend leukemia integration 1 transcription factor isoform X1
- UniProtKB/TrEMBL
-
A0A8V8TM04
- Conserved Domains (2) summary
-
- cd08541
Location:81 → 171
- SAM_PNT-FLI-1; Sterile alpha motif (SAM)/Pointed domain of friend leukemia integration 1 transcription activator
- smart00413
Location:247 → 330
- ETS; erythroblast transformation specific domain
-
XM_011542701.3 → XP_011541003.1 Friend leukemia integration 1 transcription factor isoform X1
See identical proteins and their annotated locations for XP_011541003.1
- UniProtKB/TrEMBL
-
A0A8V8TM04
- Conserved Domains (2) summary
-
- cd08541
Location:81 → 171
- SAM_PNT-FLI-1; Sterile alpha motif (SAM)/Pointed domain of friend leukemia integration 1 transcription activator
- smart00413
Location:247 → 330
- ETS; erythroblast transformation specific domain
-
XM_011542702.2 → XP_011541004.1 Friend leukemia integration 1 transcription factor isoform X2
- UniProtKB/TrEMBL
-
A0A8V8TM04
- Conserved Domains (2) summary
-
- cd08541
Location:114 → 204
- SAM_PNT-FLI-1; Sterile alpha motif (SAM)/Pointed domain of friend leukemia integration 1 transcription activator
- smart00413
Location:238 → 321
- ETS; erythroblast transformation specific domain
-
XM_047426630.1 → XP_047282586.1 Friend leukemia integration 1 transcription factor isoform X1
- UniProtKB/TrEMBL
-
A0A8V8TM04
- Related
- ENSP00000513017.1, ENST00000696982.1
Alternate T2T-CHM13v2.0
Genomic
-
NC_060935.1 Alternate T2T-CHM13v2.0
- Range
-
128719763..128845984
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)