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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_050913.1 RefSeqGene
- Range
-
5109..154814
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001276464.2 → NP_001263393.1 nuclear receptor subfamily 5 group A member 2 isoform 3
See identical proteins and their annotated locations for NP_001263393.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) has an alternate exon in place of the first two exons compared to variant 1. The resulting isoform (3) uses a downstream translation start site and has a shorter N-terminus compared to isoform 1.
- Source sequence(s)
-
AC096633, AF146343, AK304365, CA776772
- Consensus CDS
-
CCDS60383.1
- UniProtKB/TrEMBL
- B4E2M6, B6ZGU9
- Related
- ENSP00000439116.1, ENST00000544748.5
- Conserved Domains (2) summary
-
- cd07069
Location:229 → 469
- NR_LBD_Lrh-1; The ligand binding domain of the liver receptor homolog-1, a member of nuclear receptor superfamily,
- cd07167
Location:14 → 106
- NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers
-
NM_003822.5 → NP_003813.1 nuclear receptor subfamily 5 group A member 2 isoform 2
See identical proteins and their annotated locations for NP_003813.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon compared to variant 1. The resulting isoform (2) has the same N- and C-termini but is shorter compared to isoform 1.
- Source sequence(s)
-
AC096633, AF146343, CA776772
- Consensus CDS
-
CCDS1400.1
- UniProtKB/TrEMBL
- B4E2M6, B6ZGU9, F1D8R9
- Related
- ENSP00000236914.3, ENST00000236914.7
- Conserved Domains (2) summary
-
- cd07069
Location:255 → 495
- NR_LBD_Lrh-1; The ligand binding domain of the liver receptor homolog-1, a member of nuclear receptor superfamily,
- cd07167
Location:40 → 132
- NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers
-
NM_205860.3 → NP_995582.1 nuclear receptor subfamily 5 group A member 2 isoform 1
See identical proteins and their annotated locations for NP_995582.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AC096633, AF124247, AF146343, CA776772
- Consensus CDS
-
CCDS1401.1
- UniProtKB/Swiss-Prot
- B4E2P3, O00482, O95642, Q147U3
- UniProtKB/TrEMBL
-
Q9UEC0
- Related
- ENSP00000356331.3, ENST00000367362.8
- Conserved Domains (2) summary
-
- cd07069
Location:301 → 541
- NR_LBD_Lrh-1; The ligand binding domain of the liver receptor homolog-1, a member of nuclear receptor superfamily,
- cd07167
Location:86 → 178
- NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000001.11 Reference GRCh38.p14 Primary Assembly
- Range
-
200027710..200177415
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047416753.1 → XP_047272709.1 nuclear receptor subfamily 5 group A member 2 isoform X1
- UniProtKB/TrEMBL
- B4E2M6, B6ZGU9
-
XM_011509381.4 → XP_011507683.1 nuclear receptor subfamily 5 group A member 2 isoform X3
See identical proteins and their annotated locations for XP_011507683.1
- UniProtKB/TrEMBL
- B4E2M6, B6ZGU9
- Conserved Domains (2) summary
-
- cd07069
Location:261 → 501
- NR_LBD_Lrh-1; The ligand binding domain of the liver receptor homolog-1, a member of nuclear receptor superfamily,
- cd07167
Location:46 → 138
- NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers
-
XM_017000904.2 → XP_016856393.1 nuclear receptor subfamily 5 group A member 2 isoform X3
- UniProtKB/TrEMBL
- B4E2M6, B6ZGU9
- Conserved Domains (2) summary
-
- cd07069
Location:261 → 501
- NR_LBD_Lrh-1; The ligand binding domain of the liver receptor homolog-1, a member of nuclear receptor superfamily,
- cd07167
Location:46 → 138
- NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers
-
XM_011509384.3 → XP_011507686.1 nuclear receptor subfamily 5 group A member 2 isoform X3
See identical proteins and their annotated locations for XP_011507686.1
- UniProtKB/TrEMBL
- B4E2M6, B6ZGU9
- Conserved Domains (2) summary
-
- cd07069
Location:261 → 501
- NR_LBD_Lrh-1; The ligand binding domain of the liver receptor homolog-1, a member of nuclear receptor superfamily,
- cd07167
Location:46 → 138
- NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers
-
XM_047416762.1 → XP_047272718.1 nuclear receptor subfamily 5 group A member 2 isoform X2
- UniProtKB/TrEMBL
- B4E2M6, B6ZGU9
-
XM_005245062.4 → XP_005245119.1 nuclear receptor subfamily 5 group A member 2 isoform X4
See identical proteins and their annotated locations for XP_005245119.1
- UniProtKB/TrEMBL
- B4E2M6, B6ZGU9
- Conserved Domains (2) summary
-
- cd07069
Location:229 → 469
- NR_LBD_Lrh-1; The ligand binding domain of the liver receptor homolog-1, a member of nuclear receptor superfamily,
- cd07167
Location:14 → 106
- NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers
Alternate T2T-CHM13v2.0
Genomic
-
NC_060925.1 Alternate T2T-CHM13v2.0
- Range
-
199284725..199434351
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054335750.1 → XP_054191725.1 nuclear receptor subfamily 5 group A member 2 isoform X3
- UniProtKB/TrEMBL
- B4E2M6, B6ZGU9
-
XM_054335749.1 → XP_054191724.1 nuclear receptor subfamily 5 group A member 2 isoform X3
- UniProtKB/TrEMBL
- B4E2M6, B6ZGU9
-
XM_054335752.1 → XP_054191727.1 nuclear receptor subfamily 5 group A member 2 isoform X3
- UniProtKB/TrEMBL
- B4E2M6, B6ZGU9
-
XM_054335751.1 → XP_054191726.1 nuclear receptor subfamily 5 group A member 2 isoform X4
- UniProtKB/TrEMBL
- B4E2M6, B6ZGU9