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    CG17734 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41359, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG17734provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0037890
    Locus tag
    Dmel_CG17734
    See related
    AllianceGenome:FB:FBgn0037890
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RH54117; Dmel\CG17734
    Summary
    Involved in behavioral response to ethanol. Predicted to be active in mitochondrion. Is expressed in several structures, including adult head; adult heart; germline cell; and gonad. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG17734 in Genome Data Viewer
    Location:
    86D8-86D9; 3-50 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (11242208..11243999, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (7067930..7069721, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene SCP-containing protein B Neighboring gene SCP-containing protein A Neighboring gene uncharacterized protein Neighboring gene cherub

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of three parent genes and their retrogene copies in Drosophila species. O'Neill RS, et al. Int J Evol Biol, 2013. PMID 23841016, Free PMC Article
    2. Genomic imprinting absent in Drosophila melanogaster adult females. Coolon JD, et al. Cell Rep, 2012 Jul 26. PMID 22840398, Free PMC Article
    3. Base Editing of Somatic Cells Using CRISPR-Cas9 in Drosophila. Marr E, et al. CRISPR J, 2021 Dec. PMID 34813372, Free PMC Article
    4. Post-transcriptional repression of the Drosophila midkine and pleiotrophin homolog miple by HOW is essential for correct mesoderm spreading. Toledano-Katchalski H, et al. Development, 2007 Oct. PMID 17728343
    5. Retroposed new genes out of the X in Drosophila. Betrán E, et al. Genome Res, 2002 Dec. PMID 12466289, Free PMC Article

    See all (36) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in behavioral response to ethanol IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in mitochondrial respirasome assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG17734-PA
    CG17734-PB
    CG17734-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      11242208..11243999 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_141806.4 → NP_650063.1  uncharacterized protein Dmel_CG17734, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650063.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SXE6, Q9VGQ2
      Related
      FBpp0081836
      Conserved Domains (1) summary
      pfam04588
      Location:27 → 75
      HIG_1_N; Hypoxia induced protein conserved region

    2. NM_169383.3 → NP_731561.1  uncharacterized protein Dmel_CG17734, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_731561.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8INK7, Q8SXE6
      Related
      FBpp0081837
      Conserved Domains (1) summary
      pfam04588
      Location:27 → 75
      HIG_1_N; Hypoxia induced protein conserved region

    3. NM_001260114.2 → NP_001247043.1  uncharacterized protein Dmel_CG17734, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001247043.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4K6E6, D5A7S0
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4K6E6 A0A0B4K6E6
    Q8INK7 Q8INK7
    Q8SXE6 Q8SXE6
    Q9VGQ2 Q9VGQ2

    Gene LinkOut

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