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    CG1113 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40629, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG1113provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0037304
    Locus tag
    Dmel_CG1113
    See related
    AllianceGenome:FB:FBgn0037304
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG1113
    Summary
    Human ortholog(s) of this gene implicated in retinitis pigmentosa 28. Orthologous to human FAM161A (FAM161 centrosomal protein A) and FAM161B (FAM161 centrosomal protein B). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG1113 in Genome Data Viewer
    Location:
    82F7-82F7; 3-47.5 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (5253153..5255403)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (1078875..1081125)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Cathepsin F Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR44019 Neighboring gene Enolase-phosphatase Neighboring gene Tim17a2 Neighboring gene HIF prolyl hydroxylase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Fly Fam161 is an essential centriole and cilium transition zone protein with unique and diverse cell type-specific localizations. Jaiswal A, et al. Open Biol, 2024 Sep. PMID 39255847, Free PMC Article
    2. Modifiers of muscle and heart cell fate specification identified by gain-of-function screen in Drosophila. Bidet Y, et al. Mech Dev, 2003 Sep. PMID 14550529
    3. Transient junction anisotropies orient annular cell polarization in the Drosophila airway tubes. Hosono C, et al. Nat Cell Biol, 2015 Dec. PMID 26551273
    4. Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes. López-Varea A, et al. G3 (Bethesda), 2021 Dec 8. PMID 34599810, Free PMC Article
    5. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article

    See all (21) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Fly Fam161 is an essential centriole and cilium transition zone protein with unique and diverse cell type-specific localizations.
      Title: Fly Fam161 is an essential centriole and cilium transition zone protein with unique and diverse cell type-specific localizations.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in cilium assembly ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in ciliary basal body IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in ciliary transition zone IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG1113-PA
    CG1113-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      5253153..5255403
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001275348.1 → NP_001262277.1  uncharacterized protein Dmel_CG1113, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262277.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VN94

    2. NM_141265.2 → NP_649522.1  uncharacterized protein Dmel_CG1113, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649522.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VN94
      Related
      FBpp0078426
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VN94 Q9VN94

    Gene LinkOut

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