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    yip3 yippee interacting protein 3 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37683, updated on 9-Dec-2024

    Summary

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    Official Symbol
    yip3provided by FlyBase
    Official Full Name
    yippee interacting protein 3provided by FlyBase
    Primary source
    FLYBASE:FBgn0040063
    Locus tag
    Dmel_CG13549
    See related
    AllianceGenome:FB:FBgn0040063
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:AT20887; bs18b12.y1; CG13549; Dmel\CG13549; NEST:bs18b12
    Summary
    Predicted to be involved in proteolysis involved in protein catabolic process. Predicted to be part of proteasome core complex. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See yip3 in Genome Data Viewer
    Location:
    59D3-59D3; 2-102 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (23244044..23245399, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (19131567..19132922, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Large Subunit 2 Neighboring gene uncharacterized protein Neighboring gene Ribosomal protein L22-like Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A direct role for cohesin in gene regulation and ecdysone response in Drosophila salivary glands. Pauli A, et al. Curr Biol, 2010 Oct 26. PMID 20933422, Free PMC Article
    2. Correlation between desiccation stress response and epigenetic modifications of genes in Drosophila melanogaster: An example of environment-epigenome interaction. Sharma V, et al. Biochim Biophys Acta Gene Regul Mech, 2017 Oct. PMID 28801151
    3. A Drosophila LexA Enhancer-Trap Resource for Developmental Biology and Neuroendocrine Research. Kockel L, et al. G3 (Bethesda), 2016 Oct 13. PMID 27527793, Free PMC Article
    4. Systematic screening of a Drosophila ORF library in vivo uncovers Wnt/Wg pathway components. Schertel C, et al. Dev Cell, 2013 Apr 29. PMID 23583758
    5. Transcriptomic analysis of inbreeding depression in cold-sensitive Drosophila melanogaster shows upregulation of the immune response. Vermeulen CJ, et al. J Evol Biol, 2013 Sep. PMID 23944235

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in proteolysis involved in protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of proteasome core complex IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    yippee interacting protein 3
    Names
    CG13549-PA
    CG13549-PB
    yip3-PA
    yip3-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      23244044..23245399 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079095.4 → NP_523819.2  yippee interacting protein 3, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_523819.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0E8X9, Q8T8W5
      Related
      FBpp0071960
      Conserved Domains (1) summary
      cl00467
      Location:14 → 155
      Ntn_hydrolase; The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are activated autocatalytically via an N-terminally lcated nucleophilic amino acid. N-terminal nucleophile (NTN-) hydrolase superfamily, which contains a ...

    2. NM_166588.3 → NP_726300.1  yippee interacting protein 3, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_726300.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0E8X9, Q8T8W5
      Related
      FBpp0071959
      Conserved Domains (1) summary
      cl00467
      Location:14 → 155
      Ntn_hydrolase; The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are activated autocatalytically via an N-terminally lcated nucleophilic amino acid. N-terminal nucleophile (NTN-) hydrolase superfamily, which contains a ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0E8X9 Q0E8X9
    Q8T8W5 Q8T8W5
    Q9NIU4 Q9NIU4

    Gene LinkOut

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