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    CG5023 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42400, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG5023provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0038774
    Locus tag
    Dmel_CG5023
    See related
    AllianceGenome:FB:FBgn0038774
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG5023
    Summary
    Predicted to enable actin filament binding activity. Predicted to be involved in actin filament organization. Predicted to be active in actin cytoskeleton. Is expressed in adult head; adult heart; and larval muscle system. Orthologous to human TAGLN (transgelin); TAGLN2 (transgelin 2); and TAGLN3 (transgelin 3). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG5023 in Genome Data Viewer
    Location:
    92D2-92D3; 3-68 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (20169435..20174872)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (15995157..16000594)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Gustatory receptor 92a Neighboring gene long non-coding RNA:CR42836 Neighboring gene uncharacterized protein Neighboring gene Neuroligin 4 Neighboring gene long non-coding RNA:CR46043

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Differential Expression of Drosophila Transgelins Throughout Development. Vakaloglou KM, et al. Front Cell Dev Biol, 2021. PMID 34322481, Free PMC Article
    2. Variable sexually dimorphic gene expression in laboratory strains of Drosophila melanogaster. Baker DA, et al. BMC Genomics, 2007 Dec 10. PMID 18070343, Free PMC Article
    3. Flying through the drosophila cytoskeletal genome. Goldstein LS, et al. J Cell Biol, 2000 Jul 24. PMID 10908588, Free PMC Article
    4. Differential evolutionary wiring of the tyrosine kinase Btk. Nawaz HM, et al. PLoS One, 2012. PMID 22574122, Free PMC Article
    5. Mating-responsive genes in reproductive tissues of female Drosophila melanogaster. Mack PD, et al. Proc Natl Acad Sci U S A, 2006 Jul 5. PMID 16798875, Free PMC Article

    See all (30) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables actin filament binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in actin filament organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in actomyosin structure organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in actin cytoskeleton IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG5023-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      20169435..20174872
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142610.3 → NP_650867.1  uncharacterized protein Dmel_CG5023 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650867.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9I7J0
      Related
      FBpp0083275
      Conserved Domains (2) summary
      pfam00402
      Location:145 → 168
      Calponin; Calponin family repeat
      cd21207
      Location:4 → 108
      CH_dMP20-like; calponin homology (CH) domain found in Drosophila melanogaster muscle-specific protein 20 (dMP20) and similar domains
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9I7J0 Q9I7J0

    Gene LinkOut

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