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    CG13250 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40284, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG13250provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0037013
    Locus tag
    Dmel_CG13250
    See related
    AllianceGenome:FB:FBgn0037013
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG13250
    Orthologs
    all
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    Genomic context

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    See CG13250 in Genome Data Viewer
    Location:
    77C7-77D1; 3-47 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (20533709..20535335)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (20526809..20528435)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Phosphatidylserine synthase Neighboring gene NUBP iron-sulfur cluster assembly factor 2 Neighboring gene Reduction in Cnn dots 2 Neighboring gene long non-coding RNA:CR46326 Neighboring gene long noncoding RNA: testis-specific 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genetic basis of natural variation in mushroom body size in Drosophila melanogaster. Zwarts L, et al. Nat Commun, 2015 Dec 11. PMID 26656654, Free PMC Article
    2. Genome-wide association analysis of oxidative stress resistance in Drosophila melanogaster. Weber AL, et al. PLoS One, 2012. PMID 22496853, Free PMC Article
    3. Drosophila muller f elements maintain a distinct set of genomic properties over 40 million years of evolution. Leung W, et al. G3 (Bethesda), 2015 Mar 4. PMID 25740935, Free PMC Article
    4. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article
    5. Systematic genetic analysis of muscle morphogenesis and function in Drosophila. Schnorrer F, et al. Nature, 2010 Mar 11. PMID 20220848

    See all (18) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG13250-PA
    CG13250-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      20533709..20535335
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_140988.1 → NP_649245.1  uncharacterized protein Dmel_CG13250, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649245.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VPD0
      Related
      FBpp0077869, FBtr0078211
      Conserved Domains (1) summary
      smart00697
      Location:95 → 181
      DM8; Repeats found in several Drosophila proteins

    2. NM_001275190.1 → NP_001262119.1  uncharacterized protein Dmel_CG13250, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262119.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PD37
      Conserved Domains (1) summary
      smart00697
      Location:38 → 124
      DM8; Repeats found in several Drosophila proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PD37 M9PD37
    Q9VPD0 Q9VPD0

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