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    CG11168 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42981, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG11168provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039249
    Locus tag
    Dmel_CG11168
    See related
    AllianceGenome:FB:FBgn0039249
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG11168
    Summary
    Predicted to be active in cytosol. Orthologous to human ANKS1A (ankyrin repeat and sterile alpha motif domain containing 1A). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG11168 in Genome Data Viewer
    Location:
    96B6-96B8; 3-86 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (24918106..24922385)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (20743828..20748107)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene transfer RNA:Aspartic acid-GTC 3-1 Neighboring gene Phosphatidylinositol glycan anchor biosynthesis class S Neighboring gene sudestada1 Neighboring gene Mitotic spindle and nuclear protein Neighboring gene antisense RNA:CR46097 Neighboring gene Topoisomerase related function 4-2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TRF4 is involved in polyadenylation of snRNAs in Drosophila melanogaster. Nakamura R, et al. Mol Cell Biol, 2008 Nov. PMID 18765642, Free PMC Article
    2. Downregulation of lipopolysaccharide response in Drosophila by negative crosstalk between the AP1 and NF-kappaB signaling modules. Kim T, et al. Nat Immunol, 2005 Feb. PMID 15640802
    3. Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. Blanco E, et al. BMC Dev Biol, 2010 Sep 2. PMID 20813047, Free PMC Article
    4. Transient junction anisotropies orient annular cell polarization in the Drosophila airway tubes. Hosono C, et al. Nat Cell Biol, 2015 Dec. PMID 26551273
    5. Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes. López-Varea A, et al. G3 (Bethesda), 2021 Dec 8. PMID 34599810, Free PMC Article

    See all (25) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG11168-PA
    CG11168-PC
    CG11168-PD
    CG11168-PE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      24918106..24922385
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001170244.4 → NP_001163715.2  uncharacterized protein Dmel_CG11168, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163715.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      C0PUY1, E1JIW0
      Conserved Domains (5) summary
      cd00204
      Location:43 → 171
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:53 → 148
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:6 → 69
      Ank_4; Ankyrin repeats (many copies)
      pfam13857
      Location:221 → 273
      Ank_5; Ankyrin repeats (many copies)
      sd00045
      Location:48 → 79
      ANK; ANK repeat [structural motif]

    2. NM_143054.4 → NP_651311.2  uncharacterized protein Dmel_CG11168, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651311.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VC09
      Related
      FBpp0084091
      Conserved Domains (6) summary
      cd00204
      Location:43 → 171
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      cd01274
      Location:688 → 857
      PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
      pfam12796
      Location:53 → 148
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:6 → 69
      Ank_4; Ankyrin repeats (many copies)
      pfam13857
      Location:221 → 273
      Ank_5; Ankyrin repeats (many copies)
      sd00045
      Location:48 → 79
      ANK; ANK repeat [structural motif]

    3. NM_001276010.1 → NP_001262939.1  uncharacterized protein Dmel_CG11168, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262939.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VC09
      Conserved Domains (6) summary
      cd00204
      Location:43 → 171
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      cd01274
      Location:688 → 857
      PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
      pfam12796
      Location:53 → 148
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:6 → 69
      Ank_4; Ankyrin repeats (many copies)
      pfam13857
      Location:221 → 273
      Ank_5; Ankyrin repeats (many copies)
      sd00045
      Location:48 → 79
      ANK; ANK repeat [structural motif]

    4. NM_001276011.1 → NP_001262940.1  uncharacterized protein Dmel_CG11168, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262940.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4KH07
      Conserved Domains (6) summary
      cd00204
      Location:43 → 171
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      cd01274
      Location:674 → 843
      PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
      pfam12796
      Location:53 → 148
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:6 → 69
      Ank_4; Ankyrin repeats (many copies)
      pfam13857
      Location:221 → 273
      Ank_5; Ankyrin repeats (many copies)
      sd00045
      Location:48 → 79
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4KH07 A0A0B4KH07
    E1JIW0 E1JIW0
    Q95T22 Q95T22
    Q9VC09 Q9VC09

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