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    ube2j2.L ubiquitin conjugating enzyme E2 J2 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 495424, updated on 4-Jan-2025

    Summary

    Official Symbol
    ube2j2.L
    Official Full Name
    ubiquitin conjugating enzyme E2 J2 L homeolog
    Primary source
    Xenbase:XB-GENE-956516
    Locus tag
    XELAEV_18035662mg
    See related
    EnsemblRapid:ENSXLAG00005016045 AllianceGenome:Xenbase:XB-GENE-956516
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    ube2j2
    Summary
    Predicted to be located in endoplasmic reticulum membrane. Orthologous to human UBE2J2 (ubiquitin conjugating enzyme E2 J2). [provided by Alliance of Genome Resources, Jan 2025]
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    Genomic context

    See ube2j2.L in Genome Data Viewer
    Location:
    chromosome: 7L
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7L NC_054383.1 (97200907..97223010)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7L NC_030736.1 (87420620..87442334)

    Chromosome 7L - NC_054383.1Genomic Context describing neighboring genes Neighboring gene phospholipase A2 group IIE L homeolog Neighboring gene sodium channel, non voltage gated 1 delta subunit L homeolog Neighboring gene C1q and TNF related 12 Neighboring gene Beta-1,3-galactosyltransferase 6 L homeolog

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    ubiquitin conjugating enzyme E2 J2 L homeolog
    Names
    ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog)
    NP_001088550.1
    XP_018080084.1
    XP_018080085.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001095081.1NP_001088550.1  ubiquitin conjugating enzyme E2 J2 L homeolog

      See identical proteins and their annotated locations for NP_001088550.1

      Status: PROVISIONAL

      Source sequence(s)
      BC084937
      UniProtKB/TrEMBL
      A0A974HCC9, Q5U4V7
      Related
      ENSXLAP00005047270.1, ENSXLAT00005048373.1
      Conserved Domains (1) summary
      cd00195
      Location:14127
      UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054383.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      97200907..97223010
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018224596.2XP_018080085.1  ubiquitin conjugating enzyme E2 J2 L homeolog isoform X2

      UniProtKB/TrEMBL
      A0A974HCC9, Q5U4V7
    2. XM_018224595.2XP_018080084.1  ubiquitin conjugating enzyme E2 J2 L homeolog isoform X1

      UniProtKB/TrEMBL
      A0A8J0SZK6
      Related
      ENSXLAP00005047264.1, ENSXLAT00005048368.1