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    uncharacterized protein [ Saccharomyces cerevisiae S288C ]

    Gene ID: 854719, updated on 9-Dec-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    SGD:S000001351
    Locus tag
    YIL089W
    See related
    AllianceGenome:SGD:S000001351; FungiDB:YIL089W; VEuPathDB:YIL089W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in endoplasmic reticulum and fungal-type vacuole lumen. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    Location:
    chromosome: IX
    Exon count:
    1
    Sequence:
    Chromosome: IX; NC_001141.2 (195599..196216)

    Chromosome IX - NC_001141.2Genomic Context describing neighboring genes Neighboring gene rRNA-binding ribosome biosynthesis protein UTP25 Neighboring gene Ice2p Neighboring gene tRNA-Glu Neighboring gene Avt7p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001141.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An overexpression screen in Saccharomyces cerevisiae identifies novel genes that affect endocytic protein trafficking. Arlt H, et al. Traffic, 2011 Nov. PMID 21777356
    2. The nucleotide sequence of Saccharomyces cerevisiae chromosome IX. Churcher C, et al. Nature, 1997 May 29. PMID 9169870
    3. A Comprehensive Analysis of Replicative Lifespan in 4,698 Single-Gene Deletion Strains Uncovers Conserved Mechanisms of Aging. McCormick MA, et al. Cell Metab, 2015 Nov 3. PMID 26456335, Free PMC Article
    4. Exploring the yeast acetylome using functional genomics. Kaluarachchi Duffy S, et al. Cell, 2012 May 11. PMID 22579291, Free PMC Article
    5. A Functional Link Between Bir1 and the Saccharomyces cerevisiae Ctf19 Kinetochore Complex Revealed Through Quantitative Fitness Analysis. Makrantoni V, et al. G3 (Bethesda), 2017 Sep 7. PMID 28754723, Free PMC Article

    See all (16) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in fungal-type vacuole HDA PubMed 
    located_in fungal-type vacuole lumen IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in peroxisome HDA PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_012177.1
    • hypothetical protein found in the ER and vacuole lumen; overexpression of YIL089W affects endocytic protein trafficking

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001141.2 Reference assembly

      Range
      195599..196216
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001179437.1 → NP_012177.1  TPA: uncharacterized protein YIL089W [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_012177.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VVJ8, P40500
      UniProtKB/TrEMBL
      G2WG63
      Conserved Domains (1) summary
      pfam15701
      Location:29 → 190
      DUF4668; Domain of unknown function (DUF4668)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P40500.1

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