Igkv5-39 immunoglobulin kappa variable 5-39 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Igkv5-39provided by MGI
Official Full Name: immunoglobulin kappa variable 5-39provided by MGI
Primary source: MGI:MGI:2686255
See related: Ensembl:ENSMUSG00000076569 IMGT/GENE-DB:IGKV5-39; AllianceGenome:MGI:2686255
Gene type: other
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: 23-39; Gm1409
Summary: Predicted to be involved in immune response. Predicted to be part of immunoglobulin complex. Orthologous to human IGKV6-21 (immunoglobulin kappa variable 6-21 (non-functional)); IGKV6D-21 (immunoglobulin kappa variable 6D-21 (non-functional)); and IGKV6D-41 (immunoglobulin kappa variable 6D-41 (non-functional)). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

Location:: 6 C1; 6 31.67 cM

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	6	NC_000072.7 (69877408..69877961, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	6	NC_000072.6 (69900424..69900977, complement)

Chromosome 6 - NC_000072.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

Igk-V23 (e-PCR), detects polymorphism
- UniSTS:143518

Other Names

Ig kappa chain V-V region L7
anti-HIV-1 reverse transcriptase single-chain variable fragment
immunoglobulin kappa chain variable 5-39

Gene Ontology Provided by MGI

Process	Evidence Code	Pubs
involved_in immune response	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
part_of immunoglobulin complex	IBA Inferred from Biological aspect of Ancestor more info

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.