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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_009730.3 → NP_033860.2 attractin preproprotein
Status: REVIEWED
- Source sequence(s)
-
AL833771, AW124828, BE650220, BE953944, BY761276, CB519923, CB520374, CF745736, CN461550
- Consensus CDS
-
CCDS16751.1
- UniProtKB/Swiss-Prot
- A2AP43, Q9R263, Q9WU60, Q9WU77
- UniProtKB/TrEMBL
-
B9EIU3
- Related
- ENSMUSP00000028781.9, ENSMUST00000028781.9
- Conserved Domains (7) summary
-
- cd00041
Location:131 → 246
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
- cd00055
Location:1061 → 1106
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- sd00038
Location:500 → 549
- Kelch; KELCH repeat [structural motif]
- pfam01344
Location:339 → 378
- Kelch_1; Kelch motif
- pfam01437
Location:931 → 982
- PSI; Plexin repeat
- pfam13854
Location:391 → 427
- Kelch_5; Kelch motif
- cl02432
Location:787 → 919
- CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000068.8 Reference GRCm39 C57BL/6J
- Range
-
130734363..130872249
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006498606.5 → XP_006498669.1 attractin isoform X2
- UniProtKB/TrEMBL
-
B9EIU3
- Conserved Domains (7) summary
-
- smart00423
Location:683 → 729
- PSI; domain found in Plexins, Semaphorins and Integrins
- PHA03098
Location:363 → 527
- PHA03098; kelch-like protein; Provisional
- cd00041
Location:168 → 283
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
- cd00055
Location:1098 → 1143
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- sd00038
Location:537 → 586
- Kelch; KELCH repeat [structural motif]
- pfam01437
Location:968 → 1019
- PSI; Plexin repeat
- cl02432
Location:824 → 956
- CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
-
XM_011239259.2 → XP_011237561.1 attractin isoform X1
- UniProtKB/TrEMBL
-
B9EIU3
- Conserved Domains (7) summary
-
- smart00423
Location:533 → 579
- PSI; domain found in Plexins, Semaphorins and Integrins
- PHA03098
Location:213 → 377
- PHA03098; kelch-like protein; Provisional
- cd00041
Location:25 → 133
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
- cd00055
Location:948 → 993
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- sd00038
Location:387 → 436
- Kelch; KELCH repeat [structural motif]
- pfam01437
Location:818 → 869
- PSI; Plexin repeat
- cl02432
Location:674 → 806
- CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain