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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001164248.1 → NP_001157720.1 tropomyosin alpha-1 chain isoform Tpm1.1st
See identical proteins and their annotated locations for NP_001157720.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (Tpm1.1, also known as variant 1) differs in the 3' UTR and coding sequence compared to variant Tpm1.6. The encoded isoform (Tpm1.1st) is the same length, but has an alternate C-terminus, compared to isoform Tpm1.6cy.
- Source sequence(s)
-
AC166370
- Consensus CDS
-
CCDS52845.1
- UniProtKB/Swiss-Prot
-
P58771
- UniProtKB/TrEMBL
-
Q545Y3
- Related
- ENSMUSP00000109315.4, ENSMUST00000113685.10
- Conserved Domains (1) summary
-
- pfam00261
Location:48 → 282
- Tropomyosin
-
NM_001164249.1 → NP_001157721.1 tropomyosin alpha-1 chain isoform Tpm1.2st
See identical proteins and their annotated locations for NP_001157721.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (Tpm1.2, also known as variant 2) lacks an in-frame exon and has an alternate in-frame exon compared to variant Tpm1.6. The encoded isoform (Tpm1.2st) is the same length but has a short region of sequence differences, compared to isoform Tpm1.6cy.
- Source sequence(s)
-
AC166370
- Consensus CDS
-
CCDS52848.1
- UniProtKB/TrEMBL
-
B7ZNL3
- Related
- ENSMUSP00000109335.2, ENSMUST00000113705.8
- Conserved Domains (1) summary
-
- pfam00261
Location:48 → 282
- Tropomyosin
-
NM_001164250.1 → NP_001157722.1 tropomyosin alpha-1 chain isoform Tpm1.7cy
See identical proteins and their annotated locations for NP_001157722.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (Tpm1.7, also known as variant 4) lacks an exon and contains another alternate exon compared to variant Tpm1.6. The encoded isoform (Tpm1.7cy) is the same length but has short regions of sequence differences and an alternate C-terminus, compared to isoform Tpm1.6cy.
- Source sequence(s)
-
AC166370
- Consensus CDS
-
CCDS52846.1
- UniProtKB/TrEMBL
-
E9Q450
- Related
- ENSMUSP00000109327.2, ENSMUST00000113697.8
- Conserved Domains (1) summary
-
- pfam00261
Location:48 → 282
- Tropomyosin
-
NM_001164251.1 → NP_001157723.1 tropomyosin alpha-1 chain isoform Tpm1.5cy
See identical proteins and their annotated locations for NP_001157723.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (Tpm1.5, also known as variant 5) differs in the 3' UTR and coding sequence, lacks internal exon, and contains another alternate internal exon compared to variant Tpm1.6. The encoded isoform (Tpm1.5cy) is the same length but has short regions of sequence differences, compared to isoform Tpm1.6cy.
- Source sequence(s)
-
AC166370
- Consensus CDS
-
CCDS52847.1
- UniProtKB/TrEMBL
-
Q8BP43
- Related
- ENSMUSP00000051888.10, ENSMUST00000050905.16
- Conserved Domains (1) summary
-
- pfam00261
Location:48 → 282
- Tropomyosin
-
NM_001164252.1 → NP_001157724.1 tropomyosin alpha-1 chain isoform Tpm1.8cy
See identical proteins and their annotated locations for NP_001157724.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (Tpm1.8, also known as variant 6) differs in the 5' UTR and coding sequence compared to variant Tpm1.6. The encoded isoform (Tpm1.8cy) has an alternate N-terminus compared to isoform Tpm1.6cy.
- Source sequence(s)
-
AC166370
- Consensus CDS
-
CCDS52841.1
- UniProtKB/TrEMBL
-
G5E8R1
- Related
- ENSMUSP00000109325.2, ENSMUST00000113695.8
- Conserved Domains (1) summary
-
- pfam00261
Location:12 → 246
- Tropomyosin
-
NM_001164253.1 → NP_001157725.1 tropomyosin alpha-1 chain isoform Tpm1.9cy
See identical proteins and their annotated locations for NP_001157725.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (Tpm1.9, also known as variant 7) differs in the 5' UTR and coding sequence, lacks an alternate internal exon, and contains another alternate internal exon compared to variant Tpm1.6. The encoded isoform (Tpm1.9cy) has an alternate N-terminus, has a short internal region of sequence differences and is shorter, compared to isoform Tpm1.6cy.
- Source sequence(s)
-
AC166370
- Consensus CDS
-
CCDS52843.1
- UniProtKB/TrEMBL
-
G5E8R2
- Related
- ENSMUSP00000109326.2, ENSMUST00000113696.8
- Conserved Domains (1) summary
-
- pfam00261
Location:12 → 246
- Tropomyosin
-
NM_001164254.1 → NP_001157726.1 tropomyosin alpha-1 chain isoform Tpm1.13
See identical proteins and their annotated locations for NP_001157726.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (Tpm1.13, also known as variant 8) differs in the 5' and 3' UTRs as well as the 5' and 3' coding sequences compared to variant Tpm1.6. The encoded isoform (Tpm1.13) has alternate N- and C- termini and is shorter, compared to isoform Tpm1.6cy.
- Source sequence(s)
-
AC166370
- Conserved Domains (1) summary
-
- pfam00261
Location:12 → 246
- Tropomyosin
-
NM_001164255.1 → NP_001157727.1 tropomyosin alpha-1 chain isoform Tpm1.10br
See identical proteins and their annotated locations for NP_001157727.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (Tpm1.10, also known as variant 9) differs in the 3' UTR and coding sequence compared to variant Tpm1.6. The resulting isoform (9) has a shorter and distinct C-terminus compared to isoform Tpm1.6cy.
- Source sequence(s)
-
AC166370
- Consensus CDS
-
CCDS52844.1
- UniProtKB/TrEMBL
-
E9Q452
- Related
- ENSMUSP00000109323.2, ENSMUST00000113693.8
- Conserved Domains (1) summary
-
- pfam00261
Location:48 → 280
- Tropomyosin
-
NM_001164256.1 → NP_001157728.1 tropomyosin alpha-1 chain isoform Tpm1.12br
See identical proteins and their annotated locations for NP_001157728.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (Tpm1.12, also known as variant 10) differs in the 5' and 3' UTRs as well as the 5' and 3' coding sequences compared to variant Tpm1.6. The resulting isoform (Tpm1.12br) has shorter and distinct N- and C-termini compared to isoform Tpm1.6cy.
- Source sequence(s)
-
AC166370
- Consensus CDS
-
CCDS52842.1
- UniProtKB/TrEMBL
-
G5E8R0
- Related
- ENSMUSP00000109320.2, ENSMUST00000113690.8
- Conserved Domains (1) summary
-
- pfam00261
Location:12 → 244
- Tropomyosin
-
NM_024427.4 → NP_077745.2 tropomyosin alpha-1 chain isoform Tpm1.6cy
See identical proteins and their annotated locations for NP_077745.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (Tpm1.6, also known as variant 3) represents one of the longest transcripts and encodes one of the longest isoforms (Tpm1.6cy).
- Source sequence(s)
-
AC166370
- Consensus CDS
-
CCDS23311.1
- UniProtKB/TrEMBL
-
Q564G1
- Related
- ENSMUSP00000109337.3, ENSMUST00000113707.9
- Conserved Domains (1) summary
-
- pfam00261
Location:48 → 282
- Tropomyosin