U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Erp44 endoplasmic reticulum protein 44 [ Mus musculus (house mouse) ]

    Gene ID: 76299, updated on 27-Nov-2024

    Summary

    Official Symbol
    Erp44provided by MGI
    Official Full Name
    endoplasmic reticulum protein 44provided by MGI
    Primary source
    MGI:MGI:1923549
    See related
    Ensembl:ENSMUSG00000028343 AllianceGenome:MGI:1923549
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Txndc4; 1110001E24Rik
    Summary
    Predicted to enable protein disulfide isomerase activity. Predicted to be involved in several processes, including protein folding; response to endoplasmic reticulum stress; and response to unfolded protein. Located in cell surface. Is expressed in several structures, including heart and pericardium; jaw; and orbito-sphenoid. Orthologous to human ERP44 (endoplasmic reticulum protein 44). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in placenta adult (RPKM 31.9), adrenal adult (RPKM 18.5) and 28 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Erp44 in Genome Data Viewer
    Location:
    4 B1; 4 26.09 cM
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (48190711..48279635, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (48190711..48279635, complement)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_10152 Neighboring gene nuclear receptor subfamily 4, group A, member 3 Neighboring gene STARR-positive B cell enhancer ABC_E2691 Neighboring gene syntaxin 17 Neighboring gene STARR-seq mESC enhancer starr_10154 Neighboring gene STARR-positive B cell enhancer ABC_E6176 Neighboring gene microRNA 1958 Neighboring gene STARR-positive B cell enhancer ABC_E6177 Neighboring gene STARR-seq mESC enhancer starr_10155 Neighboring gene STARR-positive B cell enhancer ABC_E1644 Neighboring gene STARR-seq mESC enhancer starr_10157 Neighboring gene inversin Neighboring gene heterogeneous nuclear ribonucleoprotein F pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E6178 Neighboring gene testis expressed gene 10

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Chemically induced (ENU) (1) 
    • Endonuclease-mediated (1) 
    • Gene trapped (1) 
    • Targeted (3)  1 citation

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein disulfide isomerase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein disulfide isomerase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein disulfide isomerase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in glycoprotein metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in glycoprotein metabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in protein folding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein folding ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in protein folding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in response to endoplasmic reticulum stress ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in response to endoplasmic reticulum stress ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_or_within response to unfolded protein ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    involved_in response to unfolded protein ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in response to unfolded protein ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    located_in cell surface IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cell surface ISO
    Inferred from Sequence Orthology
    more info
     
    located_in endoplasmic reticulum lumen ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    located_in endoplasmic reticulum lumen ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in endoplasmic reticulum membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in endoplasmic reticulum membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in endoplasmic reticulum-Golgi intermediate compartment IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum-Golgi intermediate compartment IEA
    Inferred from Electronic Annotation
    more info
     
    located_in endoplasmic reticulum-Golgi intermediate compartment ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    endoplasmic reticulum resident protein 44
    Names
    ER protein 44
    endoplasmic reticulum resident protein 44kDa
    endoplasmic reticulum resident protein ERp44
    thioredoxin domain containing 4 (endoplasmic reticulum)
    thioredoxin domain-containing protein 4

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001355184.1NP_001342113.1  endoplasmic reticulum resident protein 44 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AA000229, AA434854, AK003217, AK141377, AL844861, BP759191, BY091518
      Conserved Domains (3) summary
      cd03070
      Location:52142
      PDI_b_ERp44; PDIb family, ERp44 subfamily, first redox inactive TRX-like domain b; ERp44 is an endoplasmic reticulum (ER)-resident protein, induced during stress, involved in thiol-mediated ER retention. It contains an N-terminal TRX domain with a CXFS motif followed ...
      cd03072
      Location:153263
      PDI_b'_ERp44; PDIb' family, ERp44 subfamily, second redox inactive TRX-like domain b'; ERp44 is an endoplasmic reticulum (ER)-resident protein, induced during stress, involved in thiol-mediated ER retention. It contains an N-terminal TRX domain with a CXFS motif ...
      cl00388
      Location:444
      Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold
    2. NM_029572.3NP_083848.1  endoplasmic reticulum resident protein 44 isoform 1 precursor

      Status: VALIDATED

      Source sequence(s)
      AA000229, AA434854, AK003217, AK141377, AK151497, AL844861, BP759191
      Consensus CDS
      CCDS18165.1
      UniProtKB/Swiss-Prot
      Q3TVI1, Q6A045, Q9D1Q6
      UniProtKB/TrEMBL
      Q3URM4
      Related
      ENSMUSP00000030028.5, ENSMUST00000030028.5
      Conserved Domains (3) summary
      cd02996
      Location:29136
      PDI_a_ERp44; PDIa family, endoplasmic reticulum protein 44 (ERp44) subfamily; ERp44 is an ER-resident protein, induced during stress, involved in thiol-mediated ER retention. It contains an N-terminal TRX domain, similar to that of PDIa, with a CXFS motif followed by ...
      cd03070
      Location:144234
      PDI_b_ERp44; PDIb family, ERp44 subfamily, first redox inactive TRX-like domain b; ERp44 is an endoplasmic reticulum (ER)-resident protein, induced during stress, involved in thiol-mediated ER retention. It contains an N-terminal TRX domain with a CXFS motif followed ...
      cd03072
      Location:245355
      PDI_b'_ERp44; PDIb' family, ERp44 subfamily, second redox inactive TRX-like domain b'; ERp44 is an endoplasmic reticulum (ER)-resident protein, induced during stress, involved in thiol-mediated ER retention. It contains an N-terminal TRX domain with a CXFS motif ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      48190711..48279635 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)