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    Fam236c family with sequence similarity 236, member C [ Mus musculus (house mouse) ]

    Gene ID: 69388, updated on 2-Nov-2024

    Summary

    Official Symbol
    Fam236cprovided by MGI
    Official Full Name
    family with sequence similarity 236, member Cprovided by MGI
    Primary source
    MGI:MGI:1916638
    See related
    Ensembl:ENSMUSG00000109745 AllianceGenome:MGI:1916638
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1700018G05Rik
    Summary
    Orthologous to human FAM236A (family with sequence similarity 236 member A) and FAM236B (family with sequence similarity 236 member B). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in testis adult (RPKM 23.5) and genital fat pad adult (RPKM 5.9) See more
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    Genomic context

    See Fam236c in Genome Data Viewer
    Location:
    X; X D
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (101971978..101972713)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (102928372..102929107)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_47679 Neighboring gene predicted pseudogene 9133 Neighboring gene DMRT-like family C1a Neighboring gene family with sequence similarity 236, member E Neighboring gene predicted gene 5126 Neighboring gene STARR-seq mESC enhancer starr_47680 Neighboring gene nicotinamide phosphoribosyltransferase pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_045422.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK006087, BX638054
      Related
      ENSMUST00000211116.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      101971978..101972713
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)