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    CG1024 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40789, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG1024provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0027514
    Locus tag
    Dmel_CG1024
    See related
    AllianceGenome:FB:FBgn0027514
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:LD21969; Dmel\CG1024
    Summary
    Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Is expressed in organism. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG1024 in Genome Data Viewer
    Location:
    83E5-83E5; 3-47.5 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (6377349..6380328, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (2203071..2206050, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Carnitine O-Acetyl-Transferase Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Transcription factor IIFalpha Neighboring gene godzilla E3 ubiquitin protein ligase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An in vivo genetic screen in Drosophila identifies the orthologue of human cancer/testis gene SPO11 among a network of targets to inhibit lethal(3)malignant brain tumour growth. Rossi F, et al. Open Biol, 2017 Aug. PMID 28855394, Free PMC Article
    2. Integrating computational biology and forward genetics in Drosophila. Aerts S, et al. PLoS Genet, 2009 Jan. PMID 19165344, Free PMC Article
    3. Regulation of cellular plasticity in Drosophila imaginal disc cells by the Polycomb group, trithorax group and lama genes. Klebes A, et al. Development, 2005 Aug. PMID 16077094
    4. Transcriptional networks controlling the cell cycle. Bonke M, et al. G3 (Bethesda), 2013 Jan. PMID 23316440, Free PMC Article
    5. Identification of pathways regulating cell size and cell-cycle progression by RNAi. Björklund M, et al. Nature, 2006 Feb 23. PMID 16496002

    See all (34) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables DNA-binding transcription repressor activity, RNA polymerase II-specific ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG1024-PB
    CG1024-PD
    CG1024-PE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      6377349..6380328 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001144542.2 → NP_001138014.2  uncharacterized protein Dmel_CG1024, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001138014.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      B9A0M7, Q9XZ30
      Conserved Domains (1) summary
      sd00017
      Location:30 → 51
      ZF_C2H2; C2H2 Zn finger [structural motif]

    2. NM_001275386.1 → NP_001262315.1  uncharacterized protein Dmel_CG1024, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262315.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B9A0M7, Q9XZ30
      Conserved Domains (1) summary
      sd00017
      Location:30 → 51
      ZF_C2H2; C2H2 Zn finger [structural motif]

    3. NM_141395.5 → NP_649652.4  uncharacterized protein Dmel_CG1024, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649652.4

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MZ61, Q9VI18, Q9XZ30
      Conserved Domains (1) summary
      sd00017
      Location:26 → 47
      ZF_C2H2; C2H2 Zn finger [structural motif]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B9A0M7 B9A0M7
    Q9VI18 Q9VI18
    Q9XZ30 Q9XZ30

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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