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    Vmn1r45 vomeronasal 1 receptor 45 [ Mus musculus (house mouse) ]

    Gene ID: 22297, updated on 9-Dec-2024

    Summary

    Official Symbol
    Vmn1r45provided by MGI
    Official Full Name
    vomeronasal 1 receptor 45provided by MGI
    Primary source
    MGI:MGI:1333762
    See related
    Ensembl:ENSMUSG00000044248 AllianceGenome:MGI:1333762
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    V1r2; V1RA9; V1ra2; mV1R2; V1ra11
    Summary
    Predicted to enable pheromone receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway; response to pheromone; and sensory perception of chemical stimulus. Predicted to be located in plasma membrane. Orthologous to human VN1R17P (vomeronasal 1 receptor 17 pseudogene). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See Vmn1r45 in Genome Data Viewer
    Location:
    6 D1; 6 40.02 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (89908632..89917489, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (89931650..89940507, complement)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor 44 Neighboring gene vomeronasal 1 receptor, pseudogene 28 Neighboring gene STARR-seq mESC enhancer starr_16608 Neighboring gene vomeronasal 1 receptor 46 Neighboring gene vomeronasal 1 receptor, pseudogene 29

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables pheromone receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to pheromone IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in sensory perception of chemical stimulus IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    vomeronasal type-1 receptor 45
    Names
    pheromone receptor 2
    vomeronasal 1 receptor Vmn1r45
    vomeronasal 1 receptor, A2
    vomeronasal 1, receptor 2
    vomeronasal organ family 1, receptor 2
    vomeronasal receptor 1 A9
    vomeronasal receptor V1RA11
    vomeronasal type-1 receptor A2
    vomeronasal type-1 receptor A9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_011684.2NP_035814.2  vomeronasal type-1 receptor 45

      See identical proteins and their annotated locations for NP_035814.2

      Status: VALIDATED

      Source sequence(s)
      AC080144
      Consensus CDS
      CCDS39559.1
      UniProtKB/Swiss-Prot
      Q8R2E6, Q8VIC7, Q9Z196
      Related
      ENSMUSP00000052123.4, ENSMUST00000054202.5
      Conserved Domains (1) summary
      pfam03402
      Location:54317
      V1R; Vomeronasal organ pheromone receptor family, V1R

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      89908632..89917489 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)