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    Gm839 predicted gene 839 [ Mus musculus (house mouse) ]

    Gene ID: 330379, updated on 17-Aug-2024

    Summary

    Official Symbol
    Gm839provided by MGI
    Official Full Name
    predicted gene 839provided by MGI
    Primary source
    MGI:MGI:2685685
    See related
    AllianceGenome:MGI:2685685
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Restricted expression toward ovary adult (RPKM 1.1) See more
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    Genomic context

    See Gm839 in Genome Data Viewer
    Location:
    6 D1; 6 39.85 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (89189179..89193161, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (89212197..89216179, complement)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4933427D06 gene Neighboring gene STARR-seq mESC enhancer starr_16594 Neighboring gene predicted gene 1965 Neighboring gene VISTA enhancer mm1516 Neighboring gene RIKEN cDNA 4930512J16 gene Neighboring gene STARR-seq mESC enhancer starr_16595 Neighboring gene STARR-seq mESC enhancer starr_16597 Neighboring gene predicted gene, 36735 Neighboring gene STARR-positive B cell enhancer ABC_E10391 Neighboring gene STARR-seq mESC enhancer starr_16599 Neighboring gene STARR-seq mESC enhancer starr_16600 Neighboring gene plexin A1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_033190.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BC147089

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      89189179..89193161 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_201356.1: Suppressed sequence

      Description
      NM_201356.1: This RefSeq was permanently suppressed because it is now thought that this gene does not encode a protein.