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    Vmn1r46 vomeronasal 1 receptor 46 [ Mus musculus (house mouse) ]

    Gene ID: 113856, updated on 9-Dec-2024

    Summary

    Official Symbol
    Vmn1r46provided by MGI
    Official Full Name
    vomeronasal 1 receptor 46provided by MGI
    Primary source
    MGI:MGI:2148519
    See related
    Ensembl:ENSMUSG00000061653 AllianceGenome:MGI:2148519
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    V1rb8
    Summary
    Predicted to enable signaling receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and response to pheromone. Predicted to act upstream of or within sensory perception of chemical stimulus. Predicted to be located in plasma membrane. Orthologous to human VN1R17P (vomeronasal 1 receptor 17 pseudogene). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See Vmn1r46 in Genome Data Viewer
    Location:
    6 D1; 6 40.02 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (89953153..89954082)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (89976171..89977100)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor, pseudogene 28 Neighboring gene vomeronasal 1 receptor 45 Neighboring gene STARR-seq mESC enhancer starr_16608 Neighboring gene vomeronasal 1 receptor, pseudogene 29 Neighboring gene vomeronasal 1 receptor 47

    Genomic regions, transcripts, and products

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables pheromone receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables signaling receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to pheromone IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within sensory perception of chemical stimulus TAS
    Traceable Author Statement
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    vomeronasal type-1 receptor 46
    Names
    vomernasal 1 receptor Vmn1r46
    vomeronasal 1 receptor, B8
    vomeronasal type 1 receptor B8
    vomeronasal type-1 receptor A13

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_053229.1NP_444459.1  vomeronasal type-1 receptor 46

      See identical proteins and their annotated locations for NP_444459.1

      Status: PROVISIONAL

      Source sequence(s)
      AF291494
      Consensus CDS
      CCDS20348.1
      UniProtKB/Swiss-Prot
      Q9EQ45
      UniProtKB/TrEMBL
      F6MAH5, F6MAH8
      Related
      ENSMUSP00000075197.2, ENSMUST00000075797.2
      Conserved Domains (1) summary
      pfam03402
      Location:39301
      V1R; Vomeronasal organ pheromone receptor family, V1R

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      89953153..89954082
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)