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    Sfp53D Seminal fluid protein 53D [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 8673983, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Sfp53Dprovided by FlyBase
    Official Full Name
    Seminal fluid protein 53Dprovided by FlyBase
    Primary source
    FLYBASE:FBgn0259967
    Locus tag
    Dmel_CG42477
    See related
    AllianceGenome:FB:FBgn0259967
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG42477; Dmel\CG42477; HDC06796
    Summary
    Involved in sexual reproduction. Located in extracellular space. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Sfp53D in Genome Data Viewer
    Location:
    53D5-53D5; 2-80 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (16744295..16745114, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (12631800..12632619, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR43104 Neighboring gene long non-coding RNA:CR44464 Neighboring gene uncharacterized protein Neighboring gene Accessory gland protein 53C14a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Recent De Novo Origin of Protein C-Termini. Andreatta ME, et al. Genome Biol Evol, 2015 May 21. PMID 26002864, Free PMC Article
    2. Quantitative Proteomic Analyses of Molecular Mechanisms Associated with Cytoplasmic Incompatibility in Drosophila melanogaster Induced by Wolbachia. Yuan LL, et al. J Proteome Res, 2015 Sep 4. PMID 26220534
    3. Identification and function of proteolysis regulators in seminal fluid. Laflamme BA, et al. Mol Reprod Dev, 2013 Feb. PMID 23109270, Free PMC Article
    4. Proteomic discovery of previously unannotated, rapidly evolving seminal fluid genes in Drosophila. Findlay GD, et al. Genome Res, 2009 May. PMID 19411605, Free PMC Article
    5. Proteomics reveals novel Drosophila seminal fluid proteins transferred at mating. Findlay GD, et al. PLoS Biol, 2008 Jul 29. PMID 18666829, Free PMC Article

    See all (21) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in sexual reproduction HEP PubMed 
    Component Evidence Code Pubs
    located_in extracellular space HDA PubMed 

    General protein information

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    Preferred Names
    seminal fluid protein 53D
    Names
    CG42477-PA
    CG42477-PB
    Sfp53D-PA
    Sfp53D-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      16744295..16745114 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001299571.1 → NP_001286500.1  seminal fluid protein 53D, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286500.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      C9QP87, Q6IGA5
      Conserved Domains (1) summary
      pfam01826
      Location:29 → 74
      TIL; Trypsin Inhibitor like cysteine rich domain

    2. NM_001169699.2 → NP_001163170.1  seminal fluid protein 53D, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163170.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      C9QP87, Q6IGA5
      Conserved Domains (1) summary
      pfam01826
      Location:29 → 74
      TIL; Trypsin Inhibitor like cysteine rich domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6IGA5 Q6IGA5

    Gene LinkOut

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