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    CG43333 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34830, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG43333provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0263038
    Locus tag
    Dmel_CG43333
    See related
    AllianceGenome:FB:FBgn0263038
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BG:DS01523.2; CG15291; CG32972; Dmel\CG43333
    Old locus tag
    Dmel_CG32972
    Summary
    Predicted to enable cell adhesion molecule binding activity. Predicted to be involved in cell adhesion and extracellular matrix organization. Predicted to be active in extracellular matrix and extracellular space. Is expressed in several structures, including adult brain; embryonic dorsal epidermis; embryonic head epidermis; embryonic proventriculus inner layer; and gut section. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG43333 in Genome Data Viewer
    Location:
    35A1-35A1; 2-50 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (14163508..14180686, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (14163508..14180686, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Dual-specificity tyrosine phosphorylation-regulated kinase 2 Neighboring gene long non-coding RNA:CR44727

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of the Drosophila melanogaster genome at the nuclear lamina. Pickersgill H, et al. Nat Genet, 2006 Sep. PMID 16878134
    2. Proximity labeling reveals novel interactomes in live Drosophila tissue. Mannix KM, et al. Development, 2019 Jul 18. PMID 31208963, Free PMC Article
    3. Flying toward a plastic-free world: Can Drosophila serve as a model organism to develop new strategies of plastic waste management? Pignataro E, et al. Sci Total Environ, 2024 Mar 1. PMID 38199375
    4. An exploration of the sequence of a 2.9-Mb region of the genome of Drosophila melanogaster: the Adh region. Ashburner M, et al. Genetics, 1999 Sep. PMID 10471707, Free PMC Article
    5. Genome-scale functional characterization of Drosophila developmental enhancers in vivo. Kvon EZ, et al. Nature, 2014 Aug 7. PMID 24896182

    See all (24) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables cell adhesion molecule binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in cell adhesion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in extracellular matrix organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in extracellular matrix IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG43333-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      14163508..14180686 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_176037.3 → NP_788051.1  uncharacterized protein Dmel_CG43333 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_788051.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IP52
      Related
      FBpp0297780
      Conserved Domains (2) summary
      COG2335
      Location:844 → 1026
      FAS1; Uncaracterized surface protein containing fasciclin (FAS1) repeats [General function prediction only]
      pfam02469
      Location:1042 → 1165
      Fasciclin; Fasciclin domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8IP52 Q8IP52

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