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    CG13937 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38249, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG13937provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0035287
    Locus tag
    Dmel_CG13937
    See related
    AllianceGenome:FB:FBgn0035287
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    d4ST2; Dmel\CG13937
    Summary
    Predicted to enable sulfotransferase activity. Predicted to be involved in carbohydrate biosynthetic process. Predicted to be located in membrane. Is expressed in adult fat body; embryonic/larval fat body; organism; and wing disc. Orthologous to human CHST10 (carbohydrate sulfotransferase 10) and CHST8 (carbohydrate sulfotransferase 8). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG13937 in Genome Data Viewer
    Location:
    62B7-62B9; 3-1.0 cM
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (1876551..1883041, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (1876551..1883041, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene dre4 Neighboring gene Adenine phosphoribosyltransferase Neighboring gene Tetraspan membrane protein in hair cell stereocilia

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Drosophila FACT contributes to Hox gene expression through physical and functional interactions with GAGA factor. Shimojima T, et al. Genes Dev, 2003 Jul 1. PMID 12815073, Free PMC Article
    2. The Spalt Transcription Factors Generate the Transcriptional Landscape of the Drosophila melanogaster Wing Pouch Central Region. Organista MF, et al. PLoS Genet, 2015 Aug. PMID 26241320, Free PMC Article
    3. Phenotype-based clustering of glycosylation-related genes by RNAi-mediated gene silencing. Yamamoto-Hino M, et al. Genes Cells, 2015 Jun. PMID 25940448, Free PMC Article
    4. The circadian clock interacts with metabolic physiology to influence reproductive fitness. Xu K, et al. Cell Metab, 2011 Jun 8. PMID 21641546, Free PMC Article
    5. Drosophila muller f elements maintain a distinct set of genomic properties over 40 million years of evolution. Leung W, et al. G3 (Bethesda), 2015 Mar 4. PMID 25740935, Free PMC Article

    See all (27) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables sulfotransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables sulfotransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbohydrate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG13937-PD
    CG13937-PE
    CG13937-PF
    CG13937-PG
    CG13937-PH
    CG13937-PI
    NP_001163325.1
    NP_001261297.1
    NP_001261298.1
    NP_647673.2
    NP_728688.2
    NP_728689.2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      1876551..1883041 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001274369.1 → NP_001261298.1  uncharacterized protein Dmel_CG13937, isoform I [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261298.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W070
      Conserved Domains (1) summary
      pfam03567
      Location:113 → 341
      Sulfotransfer_2; Sulfotransferase family

    2. NM_139416.3 → NP_647673.2  uncharacterized protein Dmel_CG13937, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_647673.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W070
      Conserved Domains (1) summary
      pfam03567
      Location:113 → 341
      Sulfotransfer_2; Sulfotransferase family

    3. NM_167924.3 → NP_728689.2  uncharacterized protein Dmel_CG13937, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_728689.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7YU73, Q8IRG5
      Conserved Domains (1) summary
      pfam03567
      Location:181 → 409
      Sulfotransfer_2; Sulfotransferase family

    4. NM_001274368.1 → NP_001261297.1  uncharacterized protein Dmel_CG13937, isoform H [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261297.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PBI7
      Conserved Domains (1) summary
      pfam03567
      Location:176 → 404
      Sulfotransfer_2; Sulfotransferase family

    5. NM_001169854.1 → NP_001163325.1  uncharacterized protein Dmel_CG13937, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163325.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W070
      Conserved Domains (1) summary
      pfam03567
      Location:113 → 341
      Sulfotransfer_2; Sulfotransferase family

    6. NM_167923.2 → NP_728688.2  uncharacterized protein Dmel_CG13937, isoform G [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_728688.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7YU73, Q8IRG5
      Conserved Domains (1) summary
      pfam03567
      Location:181 → 409
      Sulfotransfer_2; Sulfotransferase family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PBI7 M9PBI7
    Q8IRG5 Q8IRG5
    Q9W070 Q9W070

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