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    CG13319 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36423, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG13319provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0033781
    Locus tag
    Dmel_CG13319
    See related
    AllianceGenome:FB:FBgn0033781
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:GH19585; Dmel\CG13319
    Summary
    Predicted to be involved in proteasome assembly. Is expressed in adult head. Orthologous to human PSMG4 (proteasome assembly chaperone 4). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG13319 in Genome Data Viewer
    Location:
    49E1-49E1; 2-67 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (12923904..12924664)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (8811409..8812169)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44461 Neighboring gene NAT1 Neighboring gene sugarbabe Neighboring gene uncharacterized protein Neighboring gene Squamous cell carcinoma-related oncogene 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcriptomic analysis of inbreeding depression in cold-sensitive Drosophila melanogaster shows upregulation of the immune response. Vermeulen CJ, et al. J Evol Biol, 2013 Sep. PMID 23944235
    2. A protein complex network of Drosophila melanogaster. Guruharsha KG, et al. Cell, 2011 Oct 28. PMID 22036573, Free PMC Article
    3. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article
    4. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article
    5. A global in vivo Drosophila RNAi screen identifies NOT3 as a conserved regulator of heart function. Neely GG, et al. Cell, 2010 Apr 2. PMID 20371351, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in proteasome assembly IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG13319-PA
    CG13319-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      12923904..12924664
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_136981.3 → NP_610825.2  uncharacterized protein Dmel_CG13319, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610825.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7JWR4
      Related
      FBpp0086901, FBtr0087788
      Conserved Domains (1) summary
      pfam16093
      Location:36 → 106
      PAC4; Proteasome assembly chaperone 4

    2. NM_001169660.1 → NP_001163131.1  uncharacterized protein Dmel_CG13319, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163131.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7JWR4
      Conserved Domains (1) summary
      pfam16093
      Location:36 → 106
      PAC4; Proteasome assembly chaperone 4
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7JWR4 Q7JWR4

    Gene LinkOut

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