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    Grl40a Gustatory receptor-like 40a [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 4379897, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Grl40aprovided by FlyBase
    Official Full Name
    Gustatory receptor-like 40aprovided by FlyBase
    Primary source
    FLYBASE:FBgn0084001
    Locus tag
    Dmel_CG41434
    See related
    AllianceGenome:FB:FBgn0084001
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG41434; Dmel\CG41434; lincRNA.226
    Summary
    Predicted to enable ligand-gated channel activity. Predicted to be involved in transmembrane transport. Predicted to be active in membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Grl40a in Genome Data Viewer
    Location:
    40D4-40D4; 2-54 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (22037860..22039772)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (22037860..22039772)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR33987 Neighboring gene tiptop Neighboring gene long non-coding RNA:CR45335 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR46202

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structural screens identify candidate human homologs of insect chemoreceptors and cryptic Drosophila gustatory receptor-like proteins. Benton R, et al. Elife, 2023 Feb 20. PMID 36803935, Free PMC Article
    2. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article
    3. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
    4. The Release 6 reference sequence of the Drosophila melanogaster genome. Hoskins RA, et al. Genome Res, 2015 Mar. PMID 25589440, Free PMC Article
    5. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867, Free PMC Article

    See all (15) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    • Annotated by Drosophila Heterochromatin Genome Project, Lawrence Berkeley National Lab, http://www.dhgp.org

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables ligand-gated channel activity ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in membrane ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gustatory receptor-like 40a
    Names
    CG41434-PB
    CG41434-PC
    Grl40a-PB
    Grl40a-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      22037860..22039772
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001273751.1 → NP_001260680.1  gustatory receptor-like 40a, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260680.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PDY1

    2. NM_001042915.2 → NP_001036380.2  gustatory receptor-like 40a, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001036380.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0E8M7
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PDY1 M9PDY1
    Q0E8M7 Q0E8M7

    Gene LinkOut

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