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    CG30271 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 246518, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG30271provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0050271
    Locus tag
    Dmel_CG30271
    See related
    AllianceGenome:FB:FBgn0050271
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:AT17081; CG13528; Dmel\CG30271
    Summary
    Is expressed in embryonic head sensory system and larval labral sensory complex. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG30271 in Genome Data Viewer
    Location:
    59B2-59B2; 2-101 cM
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (22816474..22822111)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (18703979..18709634)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Cyclin B Neighboring gene stall Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Major Facilitator Superfamily Transporter 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Stall encodes an ADAMTS metalloprotease and interacts genetically with Delta in Drosophila ovarian follicle formation. Ozdowski EF, et al. Genetics, 2009 Nov. PMID 19752215, Free PMC Article
    2. Drosophila genome-wide obesity screen reveals hedgehog as a determinant of brown versus white adipose cell fate. Pospisilik JA, et al. Cell, 2010 Jan 8. PMID 20074523
    3. Transient junction anisotropies orient annular cell polarization in the Drosophila airway tubes. Hosono C, et al. Nat Cell Biol, 2015 Dec. PMID 26551273
    4. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article
    5. A global in vivo Drosophila RNAi screen identifies NOT3 as a conserved regulator of heart function. Neely GG, et al. Cell, 2010 Apr 2. PMID 20371351, Free PMC Article

    See all (22) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG30271-PF
    CG30271-PG
    CG30271-PH
    CG30271-PI

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      22816474..22822111
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001202057.3 → NP_001188986.2  uncharacterized protein Dmel_CG30271, isoform I [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001188986.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8DYM8, Q8T3R0
      Conserved Domains (3) summary
      cd00204
      Location:100 → 206
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:100 → 197
      Ank_2; Ankyrin repeats (3 copies)
      sd00045
      Location:100 → 129
      ANK; ANK repeat [structural motif]

    2. NM_166561.5 → NP_726250.3  uncharacterized protein Dmel_CG30271, isoform G [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_726250.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8DYM8, Q8T3R0
      Conserved Domains (3) summary
      cd00204
      Location:100 → 206
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:100 → 197
      Ank_2; Ankyrin repeats (3 copies)
      sd00045
      Location:100 → 129
      ANK; ANK repeat [structural motif]

    3. NM_001299816.2 → NP_001286745.1  uncharacterized protein Dmel_CG30271, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286745.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0AVU7, G2J618
      Conserved Domains (3) summary
      cd00204
      Location:79 → 185
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:79 → 176
      Ank_2; Ankyrin repeats (3 copies)
      sd00045
      Location:79 → 108
      ANK; ANK repeat [structural motif]

    4. NM_166560.4 → NP_726249.2  uncharacterized protein Dmel_CG30271, isoform H [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_726249.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MME0, Q8T3R0
      Conserved Domains (4) summary
      cd00204
      Location:86 → 192
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:86 → 183
      Ank_2; Ankyrin repeats (3 copies)
      pfam14153
      Location:376 → 468
      Spore_coat_CotO; Spore coat protein CotO
      sd00045
      Location:86 → 115
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A8DYM8 A8DYM8
    G2J618 G2J618
    Q8IHB2 Q8IHB2
    Q8MME0 Q8MME0
    Q8T3R0 Q8T3R0

    Gene LinkOut

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