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    VhaAC39-2 Vacuolar H[+] ATPase AC39 subunit 2 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42739, updated on 9-Dec-2024

    Summary

    Official Symbol
    VhaAC39-2provided by FlyBase
    Official Full Name
    Vacuolar H[+] ATPase AC39 subunit 2provided by FlyBase
    Primary source
    FLYBASE:FBgn0039058
    Locus tag
    Dmel_CG4624
    See related
    AllianceGenome:FB:FBgn0039058
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-WO0118547.227; CG4624; Dmel\CG4624; V0d; vhaAC39-2
    Summary
    Predicted to contribute to proton-transporting ATPase activity, rotational mechanism. Involved in terminal branching, open tracheal system. Predicted to be part of plasma membrane proton-transporting V-type ATPase complex and vacuolar proton-transporting V-type ATPase complex. Predicted to be active in early endosome. Is expressed in adult head. Orthologous to human ATP6V0D1 (ATPase H+ transporting V0 subunit d1) and ATP6V0D2 (ATPase H+ transporting V0 subunit d2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See VhaAC39-2 in Genome Data Viewer
    Location:
    94E2-94E2; 3-78 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (23158017..23159316, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (18983739..18985038, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene hedgehog Neighboring gene unkempt Neighboring gene uncharacterized protein Neighboring gene Inwardly rectifying potassium channel 1 Neighboring gene uncharacterized protein Neighboring gene cap-n-collar

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables proton-transporting ATPase activity, rotational mechanism IEA
    Inferred from Electronic Annotation
    more info
     
    contributes_to proton-transporting ATPase activity, rotational mechanism ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in proton transmembrane transport IC
    Inferred by Curator
    more info
     
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in terminal branching, open tracheal system IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in vacuolar acidification IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in vacuolar transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in early endosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of plasma membrane proton-transporting V-type ATPase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of proton-transporting V-type ATPase complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    part_of proton-transporting V-type ATPase, V0 domain IEA
    Inferred from Electronic Annotation
    more info
     
    part_of vacuolar proton-transporting V-type ATPase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    vacuolar H[+] ATPase AC39 subunit 2
    Names
    CG4624-PA
    VhaAC39-2-PA
    vacuolar H[+] ATPase subunit AC39-2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      23158017..23159316 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142871.1NP_651128.1  vacuolar H[+] ATPase AC39 subunit 2 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651128.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      C0PUW1, Q8MST4, Q9VCQ3
      Related
      FBpp0083793, FBtr0084401
      Conserved Domains (2) summary
      COG1527
      Location:1347
      NtpC; Archaeal/vacuolar-type H+-ATPase subunit C/Vma6 [Energy production and conversion]
      pfam01992
      Location:12342
      vATP-synt_AC39; ATP synthase (C/AC39) subunit