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    Obp56f Odorant-binding protein 56f [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 246668, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Obp56fprovided by FlyBase
    Official Full Name
    Odorant-binding protein 56fprovided by FlyBase
    Primary source
    FLYBASE:FBgn0043533
    Locus tag
    Dmel_CG30450
    See related
    AllianceGenome:FB:FBgn0043533
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    56f; anon-AE003794.1; CG30450; DmelObp56f; Dmel\CG30450; Obp-d
    Summary
    Predicted to enable odorant binding activity. Involved in sexual reproduction. Located in extracellular space. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Obp56f in Genome Data Viewer
    Location:
    56E2-56E2; 2-90 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (19713395..19713976)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (15600900..15601481)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Odorant-binding protein 56d Neighboring gene antisense RNA:CR44509 Neighboring gene Odorant-binding protein 56e Neighboring gene transfer RNA:Isoleucine-AAT 1-9 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Proteome profiling reveals tissue-specific protein expression in the male reproductive system of Drosophila melanogaster. Yamamoto MT, et al. Fly (Austin), 2010 Jan-Mar. PMID 20139713
    2. Recently evolved genes identified from Drosophila yakuba and D. erecta accessory gland expressed sequence tags. Begun DJ, et al. Genetics, 2006 Mar. PMID 16361246, Free PMC Article
    3. Association of polymorphisms in odorant-binding protein genes with variation in olfactory response to benzaldehyde in Drosophila. Wang P, et al. Genetics, 2007 Nov. PMID 17720903, Free PMC Article
    4. Modulation of feeding behavior by odorant-binding proteins in Drosophila melanogaster. Swarup S, et al. Chem Senses, 2014 Feb. PMID 24302688, Free PMC Article
    5. The seminal odorant binding protein Obp56g is required for mating plug formation and male fertility in Drosophila melanogaster. Brown NC, et al. Elife, 2023 Dec 21. PMID 38126735, Free PMC Article

    See all (42) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables odorant binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables odorant binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sensory perception of chemical stimulus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in sensory perception of smell IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in sexual reproduction HEP PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    located_in extracellular space HDA PubMed 

    General protein information

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    Preferred Names
    Odorant-binding protein 56f
    Names
    CG30450-PA
    Obp56f-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      19713395..19713976
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_166375.3 → NP_725926.1  Odorant-binding protein 56f [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_725926.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7KE32
      Related
      FBpp0085635
      Conserved Domains (1) summary
      pfam01395
      Location:52 → 120
      PBP_GOBP; PBP/GOBP family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7KE32 Q7KE32

    Gene LinkOut

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