U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG31626 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 318859, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG31626provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0051626
    Locus tag
    Dmel_CG31626
    See related
    AllianceGenome:FB:FBgn0051626
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RE20756; Dmel\CG31626
    Summary
    Predicted to enable transcription coactivator activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to be part of RNA polymerase II transcription regulator complex. Is expressed in embryonic dorsal epidermis; embryonic esophagus; embryonic foregut; embryonic head epidermis; and embryonic ventral epidermis. Orthologous to human POU2AF1 (POU class 2 homeobox associating factor 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG31626 in Genome Data Viewer
    Location:
    39B3-39B4; 2-54 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (21232495..21236733, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (21232495..21236733, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Autophagy-related 18b Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR45713 Neighboring gene mir-9374 stem loop Neighboring gene Hormone receptor-like in 39 Neighboring gene lethal (2) k14505

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The distribution of GYR- and YLP-like motifs in Drosophila suggests a general role in cuticle assembly and other protein-protein interactions. Cornman RS. PLoS One, 2010 Sep 2. PMID 20824096, Free PMC Article
    2. Identification of transcriptional responsive genes to acetic acid, ethanol, and 2-phenylethanol exposure in Drosophila melanogaster. Seong KM, et al. Pestic Biochem Physiol, 2020 May. PMID 32359537
    3. The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. Bellen HJ, et al. Genetics, 2004 Jun. PMID 15238527, Free PMC Article
    4. A gain-of-function screen identifying genes required for vein formation in the Drosophila melanogaster wing. Molnar C, et al. Genetics, 2006 Nov. PMID 16980395, Free PMC Article
    5. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    mobile_element

    • Loc: c21236435-21236273 mobile_element_type = transposon:INE-1{}5403

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables transcription coactivator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in positive regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of RNA polymerase II transcription regulator complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    CG31626-PA
    CG31626-PB

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      21232495..21236733 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_165362.2 → NP_724320.1  uncharacterized protein Dmel_CG31626, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_724320.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8INT9, Q8SXU6
      Related
      FBpp0081014
      Conserved Domains (1) summary
      PRK12323
      Location:45 → 222
      PRK12323; DNA polymerase III subunits gamma and tau; Provisional

    2. NM_165363.2 → NP_724321.1  uncharacterized protein Dmel_CG31626, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_724321.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8INT9, Q8SXU6
      Related
      FBpp0081015
      Conserved Domains (1) summary
      PRK12323
      Location:45 → 222
      PRK12323; DNA polymerase III subunits gamma and tau; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8INT9 Q8INT9
    Q8SXU6 Q8SXU6

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools