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    CheB93a Chemosensory protein B 93a [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42540, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CheB93aprovided by FlyBase
    Official Full Name
    Chemosensory protein B 93aprovided by FlyBase
    Primary source
    FLYBASE:FBgn0038888
    Locus tag
    Dmel_CG15503
    See related
    AllianceGenome:FB:FBgn0038888
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG15503; Dmel\CG15503
    Summary
    Predicted to enable lipid binding activity. Involved in detection of pheromone. Predicted to be located in extracellular space. Is expressed in prothoracic leg; prothoracic leg taste bristle; and third segment of antenna. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CheB93a in Genome Data Viewer
    Location:
    93E1-93E1; 3-72 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (21407445..21408324)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (17233167..17234046)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR46046 Neighboring gene uncharacterized protein Neighboring gene Chemosensory protein B 93b Neighboring gene ladybird late

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Adaptive evolution and the birth of CTCF binding sites in the Drosophila genome. Ni X, et al. PLoS Biol, 2012. PMID 23139640, Free PMC Article
    2. A Drosophila protein family implicated in pheromone perception is related to Tay-Sachs GM2-activator protein. Starostina E, et al. J Biol Chem, 2009 Jan 2. PMID 18952610, Free PMC Article
    3. Novel genes expressed in subsets of chemosensory sensilla on the front legs of male Drosophila melanogaster. Xu A, et al. Cell Tissue Res, 2002 Mar. PMID 11904775
    4. New genes often acquire male-specific functions but rarely become essential in Drosophila. Kondo S, et al. Genes Dev, 2017 Sep 15. PMID 29051389, Free PMC Article
    5. Affinity Density: a novel genomic approach to the identification of transcription factor regulatory targets. Hazelett DJ, et al. Bioinformatics, 2009 Jul 1. PMID 19401399, Free PMC Article

    See all (25) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables lipid binding ISA
    Inferred from Sequence Alignment
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in detection of pheromone IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in sensory perception of chemical stimulus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    located_in extracellular space ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    chemosensory protein B 93a
    Names
    CG15503-PA
    CheB93a-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      21407445..21408324
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142713.3 → NP_650970.2  chemosensory protein B 93a [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650970.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VDA3
      Conserved Domains (1) summary
      smart00675
      Location:24 → 185
      DM11; Domains in hypothetical proteins in Drosophila including 2 in CG15241 and CG9329
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VDA3 Q9VDA3

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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